Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq32 174 2e-38 seq198 105 8e-18 >seq32 Length=96279 Score = 174 bits (192), Expect = 2e-38 Identities = 553/846 (65%), Gaps = 21/846 (2%) Strand=Plus/Plus Query 75211 CCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGT 75270 ||| || ||||| ||||||| || || |||||||||||||| ||| || | Sbjct 31706 CCCCCAACACATGCTCATGCGAGTTGCTGTCGGCATCCACGGGAGTTCCATCGACGAGGC 31765 Query 75271 CTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | | || || ||| || ||||| | | ||| |||| || || | || ||||||| Sbjct 31766 CATCGACACTTACAACCTCATGTCGGAGAAGTAC-TTCACCCATGCCTCCCCCACCCTCT 31824 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| ||||||||||| | || || ||||| |||||||| || ||| ||||| | Sbjct 31825 TCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGCTTCCTGGTCACCATGAAGGACG 31884 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 |||| ||| |||| ||||| | ||||| | | || || ||| ||| ||||| Sbjct 31885 ACTCGATCGACGGCATCTACGACACTCTCAAGACCTGCGCCATGATCAGCAAGACGGCTG 31944 Query 75450 GGGGTATTGGGATGCACATCCA-TG-AT--GTGAGAGCCAATAAATCTCGTATTCGGGGG 75505 | || || || | ||||||| || || ||| | | | | | ||| || Sbjct 31945 GTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCGGCTCATAC----ATTGCCGGA 32000 Query 75506 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 75565 || || ||| || | ||||| | || ||||||||||| || ||| ||| || ||| Sbjct 32001 ACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCTTCAACAACACCGCTCGC 32060 Query 75566 TATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCA 75619 || || |||| | || ||||| ||| | || |||| ||||| | || || Sbjct 32061 TACGTCGATCAGGGTGGCAACAAGCGTCC--AGGTG-CCTTCGCCATCTACATTGAGCCC 32117 Query 75620 TGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCT 75679 ||||| | || || | |||||||| || | | ||||| || | || |||| Sbjct 32118 TGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTC 32177 Query 75680 CGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG 75739 || | || ||||| | |||| ||||| || ||| | ||||||||||| || || Sbjct 32178 CGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCTGACTTGTTCATGAAGCGAGTCGAA 32237 Query 75740 GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTG 75799 || || | ||||| || | || || | || || |||||| | || | Sbjct 32238 CAGAACGGAGAGTGGTCGCTGATGTGCCCCGCTGAGTGCCCCGGTCTCGCTGATGTCTAC 32297 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT 75859 || || ||||| || || |||||| ||||| || |||||| | || || Sbjct 32298 GGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCGTGCTCGCCGAACC 32357 Query 75860 GTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACC 75918 || | || | | | | ||||| | || ||||| | | |||||||||||||| | || Sbjct 32358 GT-CAAGGCTCAAAAGCTTTGGTACGCCGTTCTCGAGGCTCAGACGGAGACTGGCAACCC 32416 Query 75919 ATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAAT 75978 | |||||||||||||| ||| |||| ||| ||||||||||| | || || || Sbjct 32417 TTTCATGCTTTACAAGGACGCTGCTAACCGCAAGTCGAACCAAAAGAACCTCGGCACCAT 32476 Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 |||| |||| || || |||||||| || | ||||||| | | ||||||| ||||| Sbjct 32477 CAAGTGCTCTAACCTGTGCACGGAGATCATGGAGTACAGCGCTCCGGATGAGGTCGCTGT 32536 Query 76039 TTGCAA 76044 ||||| Sbjct 32537 CTGCAA 32542 >seq198 Length=283761 Score = 105 bits (116), Expect = 8e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 65071 TTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTC 65130 || ||||||||||| |||| ||||| || ||||| |||||||||||||| || ||| Sbjct 154087 TTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGCATCTTCTTCTCCGGCTCTTTC 154146 Query 65131 TGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAA 65190 | | || | ||| | |||||||| ||||||||||| || || |||||| || || Sbjct 154147 GCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAG 154206 Query 65191 CTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 || || |||||| |||||||| ||| || ||||| Sbjct 154207 CTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 154244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596566870694080