Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq32 181 1e-39 seq198 168 8e-36 seq311 125 9e-23 seq342 105 8e-17 seq58 104 3e-16 seq187 87.8 2e-11 >seq32 Length=96279 Score = 181 bits (200), Expect = 1e-39 Identities = 275/393 (70%), Gaps = 15/393 (4%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||| ||||||||||| || |||| ||| |||||||| ||||| ||||||| ||||| || Sbjct 32072 CTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 32013 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||| || || || | ||| | ||||| | || | ||| | | ||| Sbjct 32012 GACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 31953 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 |||||| || |||| |||| ||| | ||||| ||||| |||||||||||||| || Sbjct 31952 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTC 31893 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 |||||||||| |||||||| || || |||||||| || |||| |||| | || || Sbjct 31892 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 31833 Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAGGT 1630364 ||||||||||| ||||| | || |||||| ||| | ||||||| || ||| || Sbjct 31832 AGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAGGTTGTAAGT 31773 Query 1630365 GGCGAGCACGCGCGCCAGCGCATCGTCCACGTCGGCAAACCCATAGTGGCCGATGGCGAC 1630424 | || | || |||| || || | ||| | | ||||| || || Sbjct 31772 GTCG------------ATGGCCTCGT---CGATGGAACTCCCGTGGATGCCGACAGCAAC 31728 Query 1630425 GCGCATGAGCATGTACTGGGGCCGCTCGACGAC 1630457 ||||||||||||| ||||| |||||| |||| Sbjct 31727 TCGCATGAGCATGTGTTGGGGGCGCTCGGCGAC 31695 Score = 96.9 bits (106), Expect = 4e-14 Identities = 103/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628465 TCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGA 1628524 |||| || ||||| ||||| || || || ||| ||||||||||||||||||||| ||| Sbjct 32208 TCCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGA 32149 Query 1628525 GGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 1628584 ||||||| | |||| | ||| | |||||| ||||| | |||| ||| ||||| || Sbjct 32148 GGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTG 32089 Query 1628585 TGCGCTTGCCGCCGCC 1628600 |||||| ||| || Sbjct 32088 GACGCTTGTTGCCACC 32073 >seq198 Length=283761 Score = 168 bits (186), Expect = 8e-36 Identities = 212/286 (74%), Gaps = 5/286 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| | |||||| |||| ||| ||||||||||| || ||||| Sbjct 154227 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 154168 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||||| | |||| ||| ||||| ||||||||||| ||||| ||||| Sbjct 154167 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCTACGGCAGCAAA 154108 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 | | | || ||||||||||| ||| || | |||| | ||||||||| || ||||| Sbjct 154107 GGCAACCAGGCGCTCGGCAAAAGTG--GA-GTCCTCGTCGTTGATCCAGCGCAGGGCCCA 154051 Query 869359 GTCGGCCTTTTTCCTCACCGAC-GGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTT 869417 |||||||||| | | | |||| || | || || |||||| ||||||| || | Sbjct 154050 CTCGGCCTTTTGCTTGA-CGACGGGAATGGTCTCCATGGCGTCGAAGAGGTACTCGCGCT 153992 Query 869418 CGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || ||||| | || |||||||| ||||| || || ||||| Sbjct 153991 GTGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTC 153946 Score = 113 bits (124), Expect = 6e-19 Identities = 164/231 (71%), Gaps = 3/231 (1%) Strand=Plus/Minus Query 869653 GATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGACCTCCTTCATGAACCGGCC 869712 ||| ||||||||||| ||| | ||||||| | |||||||| ||||||| | Sbjct 153848 GATTTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTC 153789 Query 869713 GGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAAAGCCAGGACGTGCTTGAT 869772 | | ||||||||| |||||||| || || ||||| || || |||||||| |||| Sbjct 153788 GACGAGGTTCTCGTTGACGATGCCATCTGACGCAGCGAAGAATGCGAGGACGTGGCTGAT 153729 Query 869773 AAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGGACGGTGTCGGCGCTGAGGTC 869829 ||||| ||||||| |||| | | | |||||| | |||| | ||||| Sbjct 153728 GAAGTGTCGCTCGTTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTC 153669 Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCA 869880 | ||||||||| ||||||| ||| ||||| ||||| |||||||| | ||| Sbjct 153668 GATCTCCTCGGCCGTCCAGAACGATGCCTCTGCCTTCTTGTACATTTGCCA 153618 Score = 102 bits (112), Expect = 1e-15 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 868721 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTC 868780 || ||||| |||||||| | ||||| || |||||| | ||| || || | | Sbjct 154511 AAGAAGTTTGTCTTGCCTTGCAGCGAAATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 154452 Query 868781 TTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTAC 868840 ||||||||||| ||| ||||| | | ||||| ||||| |||||||||||||||||| Sbjct 154451 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAACTCGATGTAC 154392 Query 868841 TGGCACATGAGGCCGGCGTTCATGCCGAT 868869 |||| ||| || | |||||||||||||| Sbjct 154391 TGGCTCATAAGTCGTGCGTTCATGCCGAT 154363 >seq311 Length=507205 Score = 125 bits (138), Expect = 9e-23 Identities = 270/401 (67%), Gaps = 7/401 (2%) Strand=Plus/Plus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 ||||| |||| |||||||| || | || ||||||||||| |||| || ||||| Sbjct 310503 GTCACAACCTACGGCGAGTCTCATTGCGCCTCTGTCGGCTGCATTGTCGATGGTGTGCCC 310562 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGGC 18207 ||| | ||| | || | || | |||| ||||| ||| | || || ||||||||| Sbjct 310563 CCGGGTATGGCCCTTTCTGACGACGACGTCCAGGTCCAGCTCAGCCGTCGTCGACCGGGC 310622 Query 18208 CAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCGTCATCATCCAGTCGGGCACG 18267 ||| | || |||| |||||| ||||| || || ||| |||||||| || Sbjct 310623 CAGTCCAACCTGACCACCCCGCGCGACGAGAAGGACCGAGTCCAGATCCAGTCCGGTGTC 310682 Query 18268 GAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAGCGG 18327 || || ||| |||||||||| | ||| | | | | || |||| || || ||| Sbjct 310683 GAAAAGGGCATCACGCTCGGTACTCCCATAGCCATGCGCGTCCAGAACCAGGATCAACGG 310742 Query 18328 CCCGTCGACTATTCCGA---CATGTGCAAGGTG---CCGCGGCCCTCACACGCCGACTAC 18381 ||| |||||| | || || | | | || ||||| ||||| ||||| |||||| Sbjct 310743 CCCAACGACTACACGGACCGCACGCTCGACTTGTACCCGCGTCCCTCTCACGCTGACTAC 310802 Query 18382 ACCTACATGGCCAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGCCGGTCGTCTGCCCGC 18441 |||||| | | |||||||| ||||||| || || ||||| ||| || || || Sbjct 310803 ACCTACCTCGAGAAGTACGGTGTCAAGGCCAGCTC-GGTGGAGGACGGAGCTCGGCTCGG 310861 Query 18442 GAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAA 18482 ||||| | ||| || || || ||||| || || ||||| Sbjct 310862 GAGACGATTGGGCGTGTGGCTGCAGGCGCCGTGGCGGAGAA 310902 Score = 87.8 bits (96), Expect = 2e-11 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 19095 GGCCTCGGCGAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCG 19154 || ||||| || || ||||| || ||| |||||||| |||||| ||||||||||| || Sbjct 311231 GGTCTCGGTGAACCATGCTTCGATAAGCTCGAGGCCAAGCTCGCACACGCCATGCTCTCC 311290 Query 19155 ATCCCGGCCACCAAGGGATTCGAGATTGGCAGCGGGTT 19192 ||||| || ||||||| |||||| ||||| ||| || Sbjct 311291 ATCCCCGCTACCAAGGCTTTCGAGGTTGGCTCCGGCTT 311328 >seq342 Length=148323 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| ||| | | ||| || || |||||||| ||||||||||| | || Sbjct 79803 GCTTGGAGAGTTCACCGGGGAGGATAAGTCGGACGGCGGTTTGGATCTCGCGGGCAGAGA 79862 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||| || || || | |||||||| ||||||| |||| | Sbjct 79863 TGGTCGACTTCTTGTTGTAGGATGCAAGCTTGGAGGCCTCGGATGCGATGCGCTCGAAGA 79922 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | ||| || ||||||| || | ||| | |||||| ||||| || |||||||| Sbjct 79923 TGTCTTGGACGAAGGAGTTCAGGATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGGGT 79982 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 ||||||||||||| || ||||||| Sbjct 79983 GCACCTGCTTGAGGACACGGTAGATG 80008 >seq58 Length=76101 Score = 104 bits (114), Expect = 3e-16 Identities = 188/267 (70%), Gaps = 16/267 (6%) Strand=Plus/Plus Query 508914 TCTTCAACATCACCCAGATGTGCGGCTGCGTGGGCCAGCAGAGCAATGAGGGCCAGCGCA 508973 || |||||||| ||||||||| || || || |||||||||| | |||||| |||| Sbjct 7281 TCATCAACATCTCCCAGATGTCCGCTTGTGTCGGCCAGCAGATCGTCGAGGGCAAGCGTG 7340 Query 508974 TCCACTCCGAGTCGGGCTCGCGCACCCTGGGCTGCTACCGGCA---CGCCGAGGCCGTGC 509030 | | || ||||| || ||| || |||||| || | | ||| || | Sbjct 7341 TGCCCT-----TCGGGTTCCGATACC---GGACGCTACCA-CATTTCACAAAGGACGA-C 7390 Query 509031 CGCCG-CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGC 509089 | | |||||||| || ||||||||| |||||||| ||| || |||| | | Sbjct 7391 TTCAGTCCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAA 7450 Query 509090 GAGATGTTTCTGCACATGATCGGCGGG-CGCGAGGGCCTCGTCGACACGGCCGTCAAGAC 509148 ||| | || | ||| || |||||| || ||||| ||| |||||||||| |||||||| Sbjct 7451 GAGTTTTTCTTCCACGCCAT-GGCGGGTCGTGAGGGTCTCATCGACACGGCTGTCAAGAC 7509 Query 509149 GGCCGAGACGGGCTACATCCAGCGCCG 509175 |||||||||||| ||||| ||||| || Sbjct 7510 GGCCGAGACGGGATACATTCAGCGACG 7536 >seq187 Length=285173 Score = 87.8 bits (96), Expect = 2e-11 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||| ||||| ||| | | ||| || || ||||| || ||||||||||| | | || Sbjct 98938 GCTTGGAGAGTTCACCGGGGAGGATGAGTCGGACGGCTGTTTGGATCTCGCGTGCGGAGA 98997 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| | |||||| | || || | || |||| ||||||| |||| | Sbjct 98998 TGGTGCTCTTCTTGTTGTATGATGCGAGTTTGGAAGCTTCGGATGCGATGCGCTCGAAGA 99057 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| | || || ||||| | || | ||| | |||||||||||| || |||||||| Sbjct 99058 TGTCTTGTACGAAGGAGTTGAGGATGGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGT 99117 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | || |||||||| || ||||||| Sbjct 99118 GGACTTGCTTGAGGACACGGTAGATG 99143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107109164326022