Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq198 192 9e-43 seq342 156 7e-32 seq32 136 6e-26 seq187 129 9e-24 seq58 104 4e-16 seq110 100 5e-15 >seq198 Length=283761 Score = 192 bits (212), Expect = 9e-43 Identities = 223/300 (74%), Gaps = 3/300 (1%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || ||||| | |||||| ||| ||| ||||||||||| || ||||| Sbjct 154227 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 154168 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||||||||| ||||||| |||| ||| ||||| ||||||||||| ||||| ||||| Sbjct 154167 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCTACGGCAGCAAA 154108 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | || || ||||||||||||||| | |||| | ||||||||| || ||||| Sbjct 154107 GGCAACCAGGCGCTCGGCAAAAGTG---GAGTCCTCGTCGTTGATCCAGCGCAGGGCCCA 154051 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 ||| ||||||| | | || ||| | || || |||||| ||||||| || || Sbjct 154050 CTCGGCCTTTTGCTTGACGACGGGAATGGTCTCCATGGCGTCGAAGAGGTACTCGCGCTG 153991 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | ||||| | ||| |||||||||||||| ||||| ||||| ||||| ||||| || Sbjct 153990 TGCGGGGTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGAATGTTCTC 153931 Score = 107 bits (118), Expect = 3e-17 Identities = 150/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| | | | |||||||| |||| || || | |||||||| |||||||| Sbjct 153823 GCCTCTGCTGCCTGGACCTCTGAGCTGAACCGCTCGACGAGGTTCTCGTTGACGATGCCA 153764 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || || ||||| || ||||||||||| |||| ||||| ||||||| |||| | | | Sbjct 153763 TCTGACGCAGCGAAGAATGCGAGGACGTGGCTGATGAAGTGTCGCTCGTTGTCGTTCAAC 153704 Query 796270 ---GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326 | |||||| | | |||| | ||||||| ||||||||| ||||| || || Sbjct 153703 TTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGTCGATCTCCTCGGCCGTCCAGAACGAT 153644 Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATC 796356 ||||| ||||| |||||||| | ||| ||| Sbjct 153643 GCCTCTGCCTTCTTGTACATTTGCCAGATC 153614 >seq342 Length=148323 Score = 156 bits (172), Expect = 7e-32 Identities = 175/234 (75%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||||| |||||||||||| |||| ||||||| ||| ||||| ||| | | Sbjct 79765 GTACTTGGTGACGGACTTGGTACCCTCAGAGATGGCGTGCTTGGAGAGTTCACCGGGGAG 79824 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || |||||||| ||||||||||||| ||| || |||||| | Sbjct 79825 GATAAGTCGGACGGCGGTTTGGATCTCGCGGGCAGAGATGGTCGACTTCTTGTTGTAGGA 79884 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 || || | |||||||| ||||||| |||| ||||| | ||| || ||||||| Sbjct 79885 TGCAAGCTTGGAGGCCTCGGATGCGATGCGCTCGAAGATGTCTTGGACGAAGGAGTTCAG 79944 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||| ||||| || ||||||||||||||||||||| || Sbjct 79945 GATGGCCATAGCCTTGTTTGAGATACCAGTGTCGGGGTGCACCTGCTTGAGGAC 79998 >seq32 Length=96279 Score = 136 bits (150), Expect = 6e-26 Identities = 185/258 (72%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 ||| ||||| ||||| || |||| ||| |||||||| ||||| ||||| | ||||| || Sbjct 32072 CTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 32013 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659 | ||||| || || || | ||| | ||| | | || | ||| | | ||| Sbjct 32012 GACACCGTTAGTTCCGGCAATGTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGCC 31953 Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719 |||||| || |||| |||| ||| | ||||| | || || || ||||||||||| || Sbjct 31952 GATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGTC 31893 Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779 |||||||||| |||||||| | ||| |||||||| || |||| ||| | || || Sbjct 31892 GATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTACC 31833 Query 2073780 GGCATTGAAGAGCGTGGG 2073797 || |||||||| ||||| Sbjct 31832 AGCGTTGAAGAGGGTGGG 31815 Score = 98.7 bits (108), Expect = 2e-14 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 2071801 AGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGC-CAGTCACCACGCGGCG 2071859 || ||||| ||| | ||||| | |||||||| || ||| | || | || || Sbjct 32284 AGACCGGGGCACTCAGCGGGGCACATCAGCGACCACTCTCCGTTCTGTT-CGACTCGCTT 32226 Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| |||| ||| |||| ||| |||| ||||| || || || ||| ||||||||| Sbjct 32225 CATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTT 32166 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 |||||||||||| | |||||||| | |||| || ||| | |||||| ||||| | ||| Sbjct 32165 GCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTA 32106 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 | ||| ||||| || |||||| ||| || Sbjct 32105 GATGGCGAAGGCACCTGGACGCTTGTTGCCACC 32073 >seq187 Length=285173 Score = 129 bits (142), Expect = 9e-24 Identities = 171/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 1485471 GTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCAT 1485530 |||||||||||| | |||||| ||||| |||| ||||||| ||| ||||| ||| | | Sbjct 98900 GTACTTGGTGACCGACTTGGTCCCCTCCGAGATGGCGTGCTTGGAGAGTTCACCGGGGAG 98959 Query 1485531 GATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCG 1485590 ||| || || ||||| || ||||||||||| | | ||| ||| | |||||| || | Sbjct 98960 GATGAGTCGGACGGCTGTTTGGATCTCGCGTGCGGAGATGGTGCTCTTCTTGTT-GTATG 99018 Query 1485591 -CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 || || | || |||| ||||||| |||| ||||| | || || ||||| | Sbjct 99019 ATGCGAGTTTGGAAGCTTCGGATGCGATGCGCTCGAAGATGTCTTGTACGAAGGAGTTGA 99078 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||| | ||| | ||||||||||| || ||||||||| || |||||||| || Sbjct 99079 GGATGGCCATGGCCTTGTTGGAGATACCAGTGTCGGGGTGGACTTGCTTGAGGAC 99133 >seq58 Length=76101 Score = 104 bits (114), Expect = 4e-16 Identities = 109/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 |||||||| || ||||||||| |||||||| ||| || |||| | | ||| | Sbjct 7397 CCCGAGAGTCGAGGCTTTGTGGAGAACTCGTATCTGCGAGGTCTCACGGCACAAGAGTTT 7456 Query 431082 TTTCTGCACATGATCGGCGGG-CGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGA 431140 || | ||| || |||||| || ||||||||| |||||||||| |||||||||||||| Sbjct 7457 TTCTTCCACGCCAT-GGCGGGTCGTGAGGGTCTCATCGACACGGCTGTCAAGACGGCCGA 7515 Query 431141 GACGGGCTACATCCAGCGTCG 431161 |||||| ||||| ||||| || Sbjct 7516 GACGGGATACATTCAGCGACG 7536 >seq110 Length=924144 Score = 100 bits (110), Expect = 5e-15 Identities = 152/213 (71%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 2411386 TCAATCTTGGAGGCGGCCTCGCTGGCGCTCATCTTGCCGTCCTTGGTGAGGCCCGGCACC 2411445 |||||||||||| | || ||| || |||||||||| | |||| || || || ||| Sbjct 640513 TCAATCTTGGAGTCCGCATCGGAGGAGCTCATCTTGGAGCCCTTA---AGACCGGGTACC 640457 Query 2411446 AGCGGGTTGAGCAGGTGGATGCGCTTGCGGTAGCCCAGCGCCGGCAGGTGGTCGCGCGCA 2411505 | | ||| | || ||| |||||| |||||| ||| |||||| || ||| Sbjct 640456 ATGGCGTTCATGAGATGGGCGCGCTTTGCGTAGCCGAGCTTGGGCAGGACCTCCTCGGCA 640397 Query 2411506 AAGGCAAAGATCTTGCGCTGGTCGCGCCCGCCAAACTGGGCGTCGACGTCGAGGTGCTGC 2411565 | | | ||||| || ||||||||| || || || ||| ||||||| |||||| |||| Sbjct 640396 AGGACGAAGATTTTTCGCTGGTCGACACCTCCGAATTGGAAGTCGACGCCGAGGTACTGC 640337 Query 2411566 TCGTCGAGGGCCTGCATGAGC-GGGTAGACGAG 2411597 |||||||| || || | || | ||||||| ||| Sbjct 640336 TCGTCGAGCGCTTGGA-GACCGGGGTAGATGAG 640305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916207466910674