Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq296 138 2e-27 seq2 96.9 7e-15 >seq296 Length=257219 Score = 138 bits (152), Expect = 2e-27 Identities = 165/224 (74%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || |||||||| || || || || || ||||| ||| || Sbjct 193608 ACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCC 193549 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| || || || || || ||||| || | |||||| ||||| || || || ||||| Sbjct 193548 GTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTT 193489 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||| ||||| | || || || |||||||| || | ||||| || | || || Sbjct 193488 GTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGAT 193429 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTATAT 82818 ||||||||||| | ||||| ||||| |||||||| || |||| Sbjct 193428 GGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCATGATGATAT 193385 >seq2 Length=120822 Score = 96.9 bits (106), Expect = 7e-15 Identities = 144/203 (71%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| ||||||| || || || ||||| || || || || || || ||| ||| Sbjct 7740 CGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCG 7799 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || || || ||||| || ||||| || | || || || ||||| || || |||||| Sbjct 7800 TCCTCGAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTA 7859 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 ||||| ||||||| || || || ||||| || || | || || || | || || Sbjct 7860 TCTTGGATCTTTGTCTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATG 7919 Query 82776 GTCTTGCCTGTCAACGTCTTTAC 82798 |||||| | |||| ||||| || Sbjct 7920 GTCTTG-CAGTCAGAGTCTTGAC 7941 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981822595844074