Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq2 129 1e-24 seq359 91.5 3e-13 seq312 87.8 4e-12 seq296 84.2 5e-11 >seq2 Length=120822 Score = 129 bits (142), Expect = 1e-24 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || |||||| | || ||||| || || ||| Sbjct 7267 CAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTCCGAC 7208 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || || || || ||| |||||| ||| Sbjct 7207 ACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAA 7148 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| ||||||||||| ||||| | || | ||||||||||| || Sbjct 7147 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAACATC 7088 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| ||||||||| Sbjct 7087 CAGAAGGAGTCCACTCTTCAC 7067 Score = 129 bits (142), Expect = 1e-24 Identities = 149/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || |||||| | || ||||| || || ||| Sbjct 7495 CAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTCCGAC 7436 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || || || || ||| |||||| ||| Sbjct 7435 ACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAACAA 7376 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| ||||||||||| ||||| | || | ||||||||||| || Sbjct 7375 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAACATC 7316 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| ||||||||| Sbjct 7315 CAGAAGGAGTCCACTCTTCAC 7295 Score = 120 bits (132), Expect = 7e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || |||||| | ||||| || || || ||| Sbjct 7723 CAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCAGAC 7664 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| |||||| ||||| || || || || || ||| ||||| || Sbjct 7663 ACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGATCAACAG 7604 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| ||||||||||| ||||| | || | ||||||||||| || Sbjct 7603 CGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAACATC 7544 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| ||||||||| Sbjct 7543 CAGAAGGAGTCCACTCTTCAC 7523 Score = 109 bits (120), Expect = 1e-18 Identities = 149/207 (72%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| |||||||| || || || |||||| | ||||| || || ||| Sbjct 12110 CAGATCTTCGTCAAGACGCTCACCGGCAAGACAATCACTCTTGAAGTCGAGTCCTCAGAC 12169 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || || || || |||||| || Sbjct 12170 ACGATCGACAACGTGAAGACGAAGATCCAAGACAAGGAGGGTATCCC-CCGGACCAACAG 12228 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| ||||||||||| || || | || | |||| |||||| || Sbjct 12229 CGCCTCATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACCCTCTCCGACTACAACATC 12288 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| ||||| || |||||||||||| Sbjct 12289 CAGAAGGAGTCCACACTTCACCTTGTT 12315 Score = 104 bits (114), Expect = 6e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | || |||||| || ||| Sbjct 12337 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCAGAC 12396 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| |||||| || Sbjct 12397 ACTATCGACAACGTGAAGACGAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAG 12456 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| ||||||||||| || || | ||| | | ||||||||| || Sbjct 12457 CGCCTCATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACTCTTTCTGATTACAACATC 12516 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| ||||| || |||||| | ||| Sbjct 12517 CAGAAGGAGTCAACGCTTCACTTGGTT 12543 Score = 100 bits (110), Expect = 7e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | ||||| || ||| ||| Sbjct 12565 CAGATCTTCGTCAAGACCCTCACCGGCAAGACAATCACCCTTGAAGTCGAGTCTTCAGAC 12624 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||||| || || || || ||| |||||| ||| Sbjct 12625 ACCATCGACAATGTGAAGACCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAACAA 12684 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 || | ||||||||||| |||||| | ||||| ||| | ||| | | || |||||| || Sbjct 12685 CGATTGATCTTCGCCGGCAAGCAGCTCGAAGACGGACGTACTCTCTCTGACTACAACATC 12744 Query 206353 CAGAAAGAGTCTACTCTTCA 206372 || || ||||| || ||||| Sbjct 12745 CAAAAGGAGTCCACACTTCA 12764 Score = 89.7 bits (98), Expect = 1e-12 Identities = 152/219 (69%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || || ||||| | ||||| ||| || ||| Sbjct 11881 CAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCAGAC 11940 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| ||||| || || || || |||||| || Sbjct 11941 ACGATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAGCAG 12000 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGA-CTTTGGCCGATTACAACGT 206351 | ||||||||||||||||||||| | || || || | | | || |||| |||||| | Sbjct 12001 CGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTTCTCCGACTACAACAT 12060 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| ||||| || | ||| | ||| | | ||||| Sbjct 12061 CCAGAAGGAGTCCACATTGCACTTGGTTCTCCGCCTTCG 12099 >seq359 Length=210429 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || |||||||| | || || || || ||| | |||| | Sbjct 42319 CAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGACGC 42378 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || ||||| || |||||| || | || ||||| Sbjct 42379 CGTCAAGACCAAGATCCAGGACAAGGAAGGTATCCCCCCGGACCAACAGCGTCTCATCTT 42438 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 |||||| |||||| | || || || | ||| | |||| |||||| ||||||| ||||| Sbjct 42439 CGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGACTACAACATCCAGAAGGAGTC 42498 Query 206364 TACTCTTCAC 206373 ||||||||| Sbjct 42499 CACTCTTCAC 42508 >seq312 Length=215048 Score = 87.8 bits (96), Expect = 4e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| | || ||||| ||| ||| Sbjct 143491 CAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCCGAC 143550 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 | |||| | || ||| || || || || || ||||| || |||||| || Sbjct 143551 TCCATCGACGCCGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCACCGGACCAACAG 143610 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 |||| ||||||||||| |||||| | || || || | ||| | | || |||||| || Sbjct 143611 CGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAACATC 143670 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 ||||| ||||| ||||| ||||| || Sbjct 143671 CAGAAGGAGTCGACTCTCCACCTCGT 143696 >seq296 Length=257219 Score = 84.2 bits (92), Expect = 5e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || |||||||| || || ||||| | || || || || ||| Sbjct 193396 CAGATCTTTGTCAAGACACTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCCGAC 193455 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| ||||| || || || || || ||| ||| Sbjct 193456 ACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCCCCAGACCAACAA 193515 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||||||||| |||||| | ||||| || | || | |||| |||||| || Sbjct 193516 CGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAACATC 193575 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || ||||| || || || ||||| || Sbjct 193576 CAAAAAGAATCCACCCTCCACCTCGT 193601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181815257999086