Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 seq312 118 1e-21 seq296 113 5e-20 seq359 109 6e-19 seq32 82.4 8e-11 >seq2 Length=120822 Score = 138 bits (152), Expect = 1e-27 Identities = 153/203 (75%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || ||||| |||||||||||||||||||| || |||| | ||| |||||||| Sbjct 6841 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCGAGCTGC 6900 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| || || ||||| || ||||| || || || ||||| || || || ||||| || Sbjct 6901 TTGCCCGCGAAGATCAATCGTTGCTGGTCCGG-GGGATGCCCTCCTTGTCCTGAATCTTC 6959 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||||| ||| | ||||| || |||||||| ||||| || ||||| || ||||| Sbjct 6960 GTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTG 7019 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || |||||||| ||||| Sbjct 7020 AGGGTCTTGACGAAAATCTGCAT 7042 Score = 105 bits (116), Expect = 7e-18 Identities = 143/198 (72%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 ||||| ||||| || ||||||||||| | || ||| | ||| |||||||| || || Sbjct 12075 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAAGGGTTCGGCCGTCCTCGAGCTGCTTTCC 12016 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 || || || | |||||||| || || || ||||| || || ||||| || || || Sbjct 12015 GGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTT 11956 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 ||| ||| | ||||| || ||||| || ||||| || ||||| || ||||| | || Sbjct 11955 GACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTGAGGGT 11896 Query 134696 TTTAACGAAAATTTGCAT 134713 || ||||| || ||||| Sbjct 11895 CTTGACGAAGATCTGCAT 11878 Score = 95.1 bits (104), Expect = 1e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCT 134576 ||||| ||||| || |||||||||||| | ||| | ||| |||||||| || || Sbjct 7758 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCG 7817 Query 134577 GCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTG 134636 || || || | ||||||||| || || || ||||| || || ||||| || ||| ||| Sbjct 7818 GCGAAGATAAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGGATCTTTGTCTTG 7877 Query 134637 ACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTT 134683 || ||| | |||||||| || || || || || || ||||| || Sbjct 7878 ACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATGGTCTT 7924 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/227 (69%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || ||||| ||||| || |||||||||||| Sbjct 12332 CCACCGCGGAGACGGAGAACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAG 12273 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || | ||| ||||| || || || | ||||| || || || || Sbjct 12272 AGGGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGG-GGG 12214 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || ||||| || || || || ||| | ||||| || || || || Sbjct 12213 ATACCCTCCTTGTCTTGGATCTTCGTCTTCACGTTGTCGATCGTGTCTGAGGACTCGACT 12154 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || ||||| | || || ||||| || ||||| Sbjct 12153 TCAAGAGTGATTGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 12107 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || ||||| |||||||| ||||||||||| | || | ||| |||||||| Sbjct 12764 TGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCGTCTTCGAGCTGC 12705 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 ||||| || || ||||| || || || || || || ||||| || || || ||||| || Sbjct 12704 TTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTG 12645 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || ||| | ||||| || || || || || || || || || || ||||| Sbjct 12644 GTCTTCACATTGTCGATGGTGTCTGAAGACTCGACTTCAAGGGTGATTGTCTTGCCGGTG 12585 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| || ||||| Sbjct 12584 AGGGTCTTGACGAAGATCTGCAT 12562 >seq312 Length=215048 Score = 118 bits (130), Expect = 1e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || || || ||||| || ||||||||||| || || | Sbjct 143705 AGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGG 143646 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| |||||||| ||||| || || || | ||||| || || || || || ||||| Sbjct 143645 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGTGGGATACCTTCC 143586 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || || ||||| ||||| ||||| | | |||||| || ||||| ||||| || Sbjct 143585 TTGTCCTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTG 143526 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || ||||| || | || || ||||| || ||||| Sbjct 143525 ATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 143488 >seq296 Length=257219 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | |||||||| || |||||||| ||||| |||||||||||| Sbjct 193619 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 193560 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| |||||||| ||||| || || || | ||| || || || || || Sbjct 193559 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGG 193500 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || ||||| || || ||||| ||| | |||||||| || || || Sbjct 193499 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACC 193440 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || | || || || || || ||||| Sbjct 193439 TCGAGGGTGATGGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCAT 193393 >seq359 Length=210429 Score = 109 bits (120), Expect = 6e-19 Identities = 140/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || ||||| ||||| || |||||||||||| | ||| || ||| |||||||| Sbjct 42508 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCGAGCTG 42449 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || || | |||||| || || || || || ||||| || || || || || Sbjct 42448 CTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGGATCTT 42389 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||||| | | ||||||||| || || ||||| || || || || ||||| Sbjct 42388 GGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGT 42329 Query 134690 TAAAGTTTTAACG 134702 | || || ||| Sbjct 42328 GAGGGTCTTGACG 42316 >seq32 Length=96279 Score = 82.4 bits (90), Expect = 8e-11 Identities = 295/453 (65%), Gaps = 15/453 (3%) Strand=Plus/Plus Query 7537 ATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGCATT 7596 ||||||||| | ||| || || ||||||||||| |||| || || || ||||| Sbjct 31683 ATCAACGGCAAGGTCGCCGAGCGCCCCCAACACATGCTCATGCGAGTTGCTGTCGGCATC 31742 Query 7597 CACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAGTTT 7656 ||||| ||| |||| ||| | || || ||| | | ||||| ||| | || Sbjct 31743 CACGGGAGTTCCATCGACGAGGCCATCGACACTTACAACCTCATGTCGGAGAAGTACTTC 31802 Query 7657 ACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCGTGT 7716 || || || || |||||| | || ||| || ||| | |||||| |||| ||||| Sbjct 31803 ACCCATGCCTCCCCCACCCTCTTCAACGCTGGTACACCCAACCCTCAAATGTCATCGTGC 31862 Query 7717 TTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCTGCGCGA-TTG 7775 || || | |||||| || ||| ||||||||||| ||| |||| || | || || Sbjct 31863 TTCCTGGTCACCATGAAGGACGACTCGATCGACGGCATCTACGACACTCT-CAAGACCTG 31921 Query 7776 CGCCAATATTTCCAAATACGGC-GGCGGAATAGGTCTGAACGTAAACGACGTGCGCGCCA 7834 ||||| || | || ||||| || || || || || ||| | || | | || | | Sbjct 31922 CGCCATGATCAGC-AAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGTA 31980 Query 7835 ACGGTAGCCGCAT-CGTGTCC---ACCAACGGAAAAGCCAGCGGTTTAGAGCCCATGTTG 7890 ||| | ||| | | || || ||||| | | |||| | | ||| ||| | Sbjct 31981 CCGG----CTCATACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTT 32036 Query 7891 CGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGG---AAAGCGCAAAGGCGCC 7947 ||||| ||||| ||| | | || | || || ||||| || ||||| ||| ||| Sbjct 32037 CGCGTCTTCAACAACACCGCTCGCTACGTCGATCAGGGTGGCAACAAGCGTCCAGGTGCC 32096 Query 7948 GCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 |||||||| | ||||| |||||| | ||| Sbjct 32097 TTCGCCATCTACATTGAGCCCTGGCACTCTGAC 32129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505396087802320