Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq32 163 4e-35 seq198 105 8e-18 >seq32 Length=96279 Score = 163 bits (180), Expect = 4e-35 Identities = 554/849 (65%), Gaps = 27/849 (3%) Strand=Plus/Minus Query 111251 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAA 111310 ||||| ||||| ||||||| | | ||||||| | || || || || | ||| || Sbjct 32542 TTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGTTAGAG 32483 Query 111311 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTT-GCACGCATCCTTGTAGAG 111369 | ||| || || || | ||||||||||| ||| ||| ||| || |||||||| || Sbjct 32482 CACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCA-GCGTCCTTGTAAAG 32424 Query 111370 CATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGG 111428 |||| | || | || ||||||||||| | | ||||| || | ||||| | | | | Sbjct 32423 CATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTTTGAGC 32364 Query 111429 CTGGTACAAT--GGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 111486 || | || | |||| || || ||||| ||||||||| |||||| || || || Sbjct 32363 CTTG-ACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCCTCGAA 32307 Query 111487 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 111546 ||| || || | || | |||||| || || | || || | || ||||| | Sbjct 32306 CTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGGCACATCAGCGACCACTC 32247 Query 111547 ACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 111606 || | || || ||||||||||| | ||| || ||||| |||| | ||||| || Sbjct 32246 TCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAAAGGGCGTAGAAGAGCTC 32187 Query 111607 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 111666 | || |||| || | || ||||| | | || |||||||| | || || Sbjct 32186 ACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTC 32127 Query 111667 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTG 111720 | |||||| ||||||| |||| |||| | || | ||||| ||| | || Sbjct 32126 AGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACC---TGGACGCTTGTTGCCACCCTG 32070 Query 111721 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 111780 || || ||||| || ||| ||| || ||||||||||| || | ||||| | || Sbjct 32069 ATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAGAC 32010 Query 111781 ACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCAC--AT-CA-TGGATGTGCATCC 111836 ||| || || || ||| | | | | | ||| || || ||||||| | | Sbjct 32009 ACCGTTAGTTCCGGCAAT----GTATGAGCCGGTACCACGGATGCAGTGGATGTTGAGGC 31954 Query 111837 CAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGT 111896 | || || |||||| ||| ||| || || | | ||||| | ||||| |||| Sbjct 31953 CGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGAGTGTCGTAGATGCCGT 31894 Query 111897 TGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTAC 111956 ||| ||||| ||||| ||| || |||||||| ||||| || || | ||||||| Sbjct 31893 CGATCGAGTCGTCCTTCATGGTGACCAGGAAGCACGATGACATTTGAGGGTTGGGTGTAC 31834 Query 111957 CAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTAT 112015 |||| ||||||||||| || | || || |||| ||| | | ||||| || ||| Sbjct 31833 CAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACATGAGGTTGTAA 31775 Query 112016 GTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATG 112075 || || | | | || ||| |||||||||||||| || || ||||||| |||| Sbjct 31774 GTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCATGAGCATG 31715 Query 112076 TACTGTGGG 112084 | || ||| Sbjct 31714 TGTTGGGGG 31706 >seq198 Length=283761 Score = 105 bits (116), Expect = 8e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| |||||||| |||||| || || || || |||||| ||||| Sbjct 154244 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 154185 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||||||| |||||||| | ||| | || | | ||| || |||||||||||||| Sbjct 154184 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATG 154125 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 ||||| || ||||| |||| ||||| ||||| || Sbjct 154124 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAA 154087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029126753600