Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq326 145 2e-29 seq2 136 1e-26 >seq326 Length=175690 Score = 145 bits (160), Expect = 2e-29 Identities = 462/711 (65%), Gaps = 14/711 (2%) Strand=Plus/Plus Query 349226 TATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGT 349285 || || |||||||| || ||||||||||| || || || | || || || || || ||| Sbjct 117524 TACTCCTGTGTTGCCGTATGGCAAAATGACCGCGTTGAGGTCATCGCCAACGACCAGGGT 117583 Query 349286 AACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCT 349345 ||| | ||||| || |||||||| || || ||||| | ||||| | || ||||| | Sbjct 117584 AACCGCACAACCCCCTCATACGTCGCCTTCACCGACTCAGAGCGCCTCATCGGTGACGCC 117643 Query 349346 GCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATT 349405 || || || || | || || || | || || || || || || |||||||| || Sbjct 117644 GCCAAGAACCAGACCGCCATGAACCCCCACAACACAGTCTTCGACGCCAAGCGACTCATC 117703 Query 349406 GGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCTTTTACTGT- 349464 || | | || ||||| ||| || || | || || | || || | || Sbjct 117704 GGCCGCAAGTTCGCTGACTCCGAGGTACAGTCCGACATGAAGCACTGGCCCTTCAAGGTC 117763 Query 349465 -TGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTGA-ACAAAAA 349522 | |||| ||| || ||||| || |||| || || || || || || || | Sbjct 117764 ATCGACCAA-----GGTACCAAGCCAATAATCCAGGTCGAGTACAAGGGCGAGACCAAGA 117818 Query 349523 CAATTTTTACCC--GAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTG 349580 | ||| |||| || || | || | |||||| | | || ||| || | ||| | Sbjct 117819 C---TTTCACCCCTGAGGAGGTCTCCGCCATGGTTCTGCTCAAGATGCGCGAGACTGCCG 117875 Query 349581 AAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATG 349640 | || || | |||| | || | || || || | ||||| || ||||| || || | Sbjct 117876 AGGCCTACCTCGGTGGCTCCGTCAAGGACGCCGTCGTCACTGTTCCCGCCTACTTCAACG 117935 Query 349641 ATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAA 349700 | | || || || || || || || || | |||||| || | || || | ||| Sbjct 117936 ACTCTCAACGACAGGCCACCAAGGACGCCGGTACCATTGCCGGTCTCAACGTCATGCGAA 117995 Query 349701 TGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAG 349760 | || || || |||||||| || || ||||| || || || || || | | | || | Sbjct 117996 TCATCAACGAGCCCACTGCCGCTGCCATTGCTTACGGTCTCGACAAGAAGGGCGAGGGCG 118055 Query 349761 aaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACAC 349820 | || || |||| || || || || || || || || || ||||| || || || || Sbjct 118056 AGAAGAACGTTCTCATCTTCGACTTGGGAGGAGGCACGTTCGATGTCTCGCTCCTCACCA 118115 Query 349821 TTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAG 349880 | || ||||| || || || || || || ||||| ||||| || || | ||||| || | Sbjct 118116 TCGAGGAGGGCATATTCGAGGTCAAGGCCACTGCCGGTGACACCCACTTGGGTGGCGAGG 118175 Query 349881 ATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG 349931 | || || || |||||||| | || || || | || || ||||| |||| Sbjct 118176 ACTTCGACAACCGTCTCGTAACCCACTTCGTCCAGGAGTTCAAGCG-CAAG 118225 >seq2 Length=120822 Score = 136 bits (150), Expect = 1e-26 Identities = 167/227 (74%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 140511 CCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGAT 140570 |||||||| | | || || | ||||||||| ||||| |||||||| || || || || Sbjct 6817 CCACCACGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 6876 Query 140571 AATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGA 140630 | || || || ||||| || || || || || ||||| | |||||||| || || ||| Sbjct 6877 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGGA 6936 Query 140631 ATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACT 140690 | || || || |||||||| || | || ||||| ||||| | || |||| ||| || Sbjct 6937 -TGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACC 6995 Query 140691 TCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| | ||||| ||||| || || || || ||||||||||| Sbjct 6996 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 7042 Score = 127 bits (140), Expect = 6e-24 Identities = 168/232 (72%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| | || | || ||||| || || || || || || Sbjct 12109 CATACCACCACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTC 12050 Query 140567 AGATAA-TGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAG 140625 || || ||||| || || || || || ||||| || ||||| || || ||||| || | Sbjct 12049 GGAGAAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCG 11990 Query 140626 GAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTT 140685 |||| || || || || || || || || | || ||||| || |||| || |||| || Sbjct 11989 GAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATT 11930 Query 140686 CAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||||| ||||| | ||||| ||||| || || || || || |||||||| Sbjct 11929 CAACTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 11878 Score = 120 bits (132), Expect = 9e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || | |||||||| ||||| || || || || ||||| Sbjct 7040 CATACCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATC 7099 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || | || || || || ||||| | ||||| || || || Sbjct 7100 GGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGG 7159 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | |||||||| || |||| || || || Sbjct 7160 AGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTC 7219 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || || ||||||||||| Sbjct 7220 CACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 7270 Score = 120 bits (132), Expect = 9e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || | |||||||| ||||| || || || || ||||| Sbjct 7268 CATACCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATC 7327 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||| || | || || || || ||||| | ||||| || || || Sbjct 7328 GGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGG 7387 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || ||||| || || | |||||||| || |||| || || || Sbjct 7388 AGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTC 7447 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || ||||| || | ||||| ||||| || || || || ||||||||||| Sbjct 7448 CACCTCAAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 7498 Score = 107 bits (118), Expect = 6e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | || || | || || || ||||| ||||| || || ||||| Sbjct 11880 CATACCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATC 11821 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || || || || ||||| || || || ||||| || || ||||| || || Sbjct 11820 GGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGG 11761 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || || || || || || | || ||||| ||||| | || || | || Sbjct 11760 AGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTC 11701 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725 ||| ||||| || | ||||| || || || || || || Sbjct 11700 AACCTCAAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 11662 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 |||||||||||| | | ||||| | || | || ||||| || || || || || || Sbjct 7724 CATACCACCACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTC 7783 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | ||||| || || || || || ||||| || ||||| ||||| ||||| || || Sbjct 7784 GGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCCGG 7843 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||| || || ||||| || || || | || || || ||||| | || || | || Sbjct 7844 AGGAATGCCCTCCTTATCTTGGATCTTTGTCTTGACGTTGTCAATGGTGTCGGAGGACTC 7903 Query 140687 AACTTCAAGTGTAACTGTCTT 140707 ||| ||||| || | ||||| Sbjct 7904 AACCTCAAGGGTGATGGTCTT 7924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515247294403898