Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 2e-11 >seq2 Length=120822 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| || || || || || || || || || |||| || || ||| || Sbjct 7270 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTCC 7211 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| ||||| || || || || ||||| || || |||| ||| | Sbjct 7210 GACACGATCGACAAT--GTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 7153 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| || || || ||||| || || ||||| || | |||| | | |||||||||| Sbjct 7152 AACAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACA 7093 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||| || ||| |||| | || ||||| | ||| | || || || Sbjct 7092 ACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGTCTCCGCGGTGG 7044 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| || || || || || || || || || |||| || || ||| || Sbjct 7498 ATGCAGATTTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTTGAGGTGGAGAGCTCC 7439 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| ||||| || || || || ||||| || || |||| ||| | Sbjct 7438 GACACGATCGACAAT--GTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACC 7381 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| || || || ||||| || || ||||| || | |||| | | |||||||||| Sbjct 7380 AACAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACA 7321 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||||| || ||| |||| | || ||||| | ||| | || || || Sbjct 7320 ACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGTCTCCGCGGTGG 7272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355860812631282