Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq198 113 6e-20 seq32 84.2 3e-11 >seq198 Length=283761 Score = 113 bits (124), Expect = 6e-20 Identities = 156/218 (72%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 48138 AAACATGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 48197 || || ||||| || || ||||| || |||| || || | ||||| || || ||| Sbjct 154250 AAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTG 154191 Query 48198 AGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAG 48257 ||||||||||| || ||||| || |||||||| || || | |||||||| || || ||| Sbjct 154190 AGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAG 154131 Query 48258 AATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAACTGG---CTTCGTTG 48314 || ||||| |||||||| ||||| || || | ||| | || ||| | |||| | Sbjct 154130 AAGATGCCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAAGTGGAGTCCTCGTCG 154071 Query 48315 TGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTAC 48352 | ||||| || | ||||| || ||||| | ||| || Sbjct 154070 TTGATCCAGCGCAGGGCCCACTCGGCCTTTTGCTTGAC 154033 >seq32 Length=96279 Score = 84.2 bits (92), Expect = 3e-11 Identities = 220/335 (66%), Gaps = 2/335 (1%) Strand=Plus/Minus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||| | |||| || || || || || | |||||| | | || ||||| ||| ||| Sbjct 32321 GTAGAGAGCC--TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCAGCGGGG 32264 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 ||||||| ||||| || || | | | ||||| ||||| || | ||||| ||||| Sbjct 32263 CACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCAGGGATCCAA 32204 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 || || || || || |||| || || || || || ||||| | || ||| Sbjct 32203 AGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCG 32144 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 || ||||| | | ||||| ||||| || || | || || || | | || || || Sbjct 32143 AGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGC 32084 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || || || |||||||| | || | |||||||| || | || | | ||| || | Sbjct 32083 TTGTTGCCACCCTGATCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACG 32024 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATA 78247 ||||||||||| || || ||||| | ||| || Sbjct 32023 ATACCGTTAGAGACACCGTTAGTTCCGGCAATGTA 31989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665621890240