Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2 134 3e-26 seq296 120 7e-22 seq312 116 9e-21 seq327 109 1e-18 seq359 104 5e-17 >seq2 Length=120822 Score = 134 bits (148), Expect = 3e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | |||||| || ||||| |||||||||||||| || | | ||| | Sbjct 12780 GAGACGGAGGACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACG 12721 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || ||||||||||| | | || ||||||| | || || || Sbjct 12720 TCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTC 12661 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || || ||| | || | | |||||||| ||| |||||||| || Sbjct 12660 CTTGTCCTGAATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCGACTTCAAGGGT 12601 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| ||||||| |||||| Sbjct 12600 GATTGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 12562 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | |||||||| ||||| || |||||||||||||||| | || | Sbjct 7508 GAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCG 7567 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || | || ||||||||||| | | ||| || |||| | || || || Sbjct 7568 GCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGAATGCCCTC 7627 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || ||| | || | ||||||| ||||| ||||| ||||| Sbjct 7628 CTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCTGAGCTCTCGACTTCGAGAGT 7687 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||| ||||||| |||||| Sbjct 7688 GATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 7726 Score = 122 bits (134), Expect = 2e-22 Identities = 148/202 (73%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | || || || ||||| ||||||||||||||||||| | || | || || Sbjct 11862 GAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTC 11803 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||||||||||| | || || ||||| || Sbjct 11802 CTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 11743 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || |||||| | || | | |||||||| ||| || ||||| || || || Sbjct 11742 TTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGT 11683 Query 152072 TTTGCCCGTGAGAGTCTTCACG 152093 ||||| || |||||||| ||| Sbjct 11682 CTTGCCAGTCAGAGTCTTAACG 11661 Score = 122 bits (134), Expect = 2e-22 Identities = 149/200 (75%), Gaps = 5/200 (3%) Strand=Plus/Minus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAG-TTCTCCCATCTTCTAG--GCTTTTC 151964 || ||||| || ||||||||||| |||| || | ||| || || || || ||||| Sbjct 12075 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAAGGGTTCGGCCGTCCTCGAGCTGCTTT-- 12018 Query 151965 CCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGT 152024 |||||||||||||| | ||||||||||| | ||| || ||||| ||||| || || Sbjct 12017 CCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTC 11958 Query 152025 TTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGA 152084 |||||| | || | ||||||| || ||||| || || || || ||||| ||||| Sbjct 11957 TTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTGAGG 11898 Query 152085 GTCTTCACGAAGACCTGCAT 152104 ||||| ||||||| |||||| Sbjct 11897 GTCTTGACGAAGATCTGCAT 11878 Score = 122 bits (134), Expect = 2e-22 Identities = 159/219 (73%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| ||||| ||||| || ||||| || ||||||||||| |||| | || | Sbjct 12324 GAGACGGAGAACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCG 12265 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || | || ||||||||||| || | ||| ||||||| | ||| || || Sbjct 12264 GCCGTCCTCCAACTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCGGGG-GATACCCTC 12206 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || || || | || | ||||||| ||| ||||||||||| Sbjct 12205 CTTGTCTTGGATCTTCGTCTTCACGTTGTCGATCGTGTCTGAGGACTCGACTTCAAGAGT 12146 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| ||||||| |||||| Sbjct 12145 GATTGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 12107 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | |||||||| ||||| || |||||||||||||||| | || | Sbjct 7052 GAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCG 7111 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || | || ||||||||||| | | || ||||||| | || || || Sbjct 7112 GCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTC 7171 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || ||| | || | |||| || ||||| || |||||||| Sbjct 7172 CTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGT 7231 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| ||||| | |||||| Sbjct 7232 GATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 7270 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| | |||||||| ||||| || |||||||||||||||| | || | Sbjct 7280 GAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCG 7339 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 ||||| || | || ||||||||||| | | || ||||||| | || || || Sbjct 7340 GCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTC 7399 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || || ||| | || | |||| || ||||| || |||||||| Sbjct 7400 CTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCAAGAGT 7459 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| ||||| | |||||| Sbjct 7460 GATGGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCAT 7498 Score = 100 bits (110), Expect = 7e-16 Identities = 137/188 (73%), Gaps = 5/188 (3%) Strand=Plus/Plus Query 151908 GTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAG--GCTTTTCC 151965 || ||||| || ||||||||||| |||| | |||| || || || || ||||| | Sbjct 7758 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTT--C 7815 Query 151966 CGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTT 152025 ||||||||||||| | ||||||||||| | || || ||||| ||||| || ||| | Sbjct 7816 CGGCGAAGATAAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGGATCTTTGTCT 7875 Query 152026 TGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAG 152085 |||| | || | | |||| || ||| || ||||| || || || ||| | || |||| Sbjct 7876 TGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATGGTCTTG-CAGTCAGAG 7934 Query 152086 TCTTCACG 152093 |||| ||| Sbjct 7935 TCTTGACG 7942 Score = 96.9 bits (106), Expect = 8e-15 Identities = 147/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || ||||| || |||||||||||||| | | ||| | || || || | Sbjct 12540 CAAG-TGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCCA 12482 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || ||||||||||| || | ||||||||||| | || || ||||| || || | Sbjct 12481 ACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGA 12422 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | ||||||| || || || || || || || |||| Sbjct 12421 TCTTCGTCTTCACGTTGTCGATAGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGC 12362 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| ||||||| |||||| Sbjct 12361 CGGTGAGGGTCTTGACGAAGATCTGCAT 12334 >seq296 Length=257219 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| || || || || || ||||||||||||||||| |||| || |||| Sbjct 193611 GAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCG 193552 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || ||||||||||| || | || ||||| | | ||| || || Sbjct 193551 GCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTC 193492 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| ||||| || || ||||| | || | |||| || |||||| || || || Sbjct 193491 CTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGT 193432 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| ||||| ||||| || |||| |||||| Sbjct 193431 GATGGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCAT 193393 >seq312 Length=215048 Score = 116 bits (128), Expect = 9e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || || ||||| ||||| || ||||||||||| || | | ||| | || || Sbjct 143699 AGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCC 143640 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||| ||||||| | ||| |||||||| || Sbjct 143639 TCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGTGGGATACCTTCCTTGTCC 143580 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || ||||| ||||| | || | | ||| ||| ||| || || || || ||||| Sbjct 143579 TGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTC 143520 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| || ||||| ||||||| |||||| Sbjct 143519 TTACCCGTCAGGGTCTTGACGAAGATCTGCAT 143488 >seq327 Length=173597 Score = 109 bits (120), Expect = 1e-18 Identities = 154/213 (72%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || |||| ||||||| ||||||||||| |||| | || | || || Sbjct 94553 AGGACAAGGTGGAGAG---ACTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 94497 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || |||||||||||||| | ||| ||||||| | | | |||||||| || Sbjct 94496 TCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGGTGCCTTCCTTGTCC 94437 Query 152013 TGAATTTTTTGTTTGACAG-TCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || | | || || || | | | || | | ||||| || ||||||||||| || | Sbjct 94436 TGGA-TCTTGGTCTGGCCGTTGTCGATCGTATCTGATGAATCGACTTCAAGAGTGATGGC 94378 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||| ||||||| |||||| Sbjct 94377 CTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 94345 >seq359 Length=210429 Score = 104 bits (114), Expect = 5e-17 Identities = 144/202 (71%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| | |||||||| ||||| || ||||||||||| |||| | ||| | || || Sbjct 42517 GAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTC 42458 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || || ||||||||||| || | ||| ||||||| | ||| |||||||| || Sbjct 42457 CTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTC 42398 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 || || || ||||| | || | | ||| || ||| || || || || || || Sbjct 42397 CTGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGT 42338 Query 152072 TTTGCCCGTGAGAGTCTTCACG 152093 ||||| ||||| ||||| ||| Sbjct 42337 CTTGCCGGTGAGGGTCTTGACG 42316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153815389301586