Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F001689995.1_202016-07-20] 366 sequences; 37,460,344 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2 143 2e-29 seq359 127 1e-24 seq312 116 3e-21 seq296 109 4e-19 >seq2 Length=120822 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||||||| |||||| |||||||||||||| | || ||| |||| ||| Sbjct 12542 ACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCGTCCTCC 12483 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||| ||||| | |||||||| || | ||| | || ||||| ||| Sbjct 12482 AACTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 12423 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | || ||||| | ||||||||||| | || || ||||| Sbjct 12422 ATCTTCGTCTTCACGTTGTCGATAGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTG 12363 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||| ||||| Sbjct 12362 CCGGTGAGGGTCTTGACGAAGATCTGCAT 12334 Score = 127 bits (140), Expect = 1e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| |||||| |||||||||||||||| || ||| | || ||| Sbjct 7062 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 7121 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||| |||||||| || || || || | ||| | || ||||| ||| Sbjct 7122 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 7181 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||||| | |||||||| | || || |||| Sbjct 7182 ATCTTGGTCTTTACATTGT--CGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCT 7239 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||| ||||| || ||||| Sbjct 7240 TGCCGGTGAGGGTCTTGACGAAAATCTGCAT 7270 Score = 127 bits (140), Expect = 1e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| |||||| |||||||||||||||| || ||| | || ||| Sbjct 7290 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 7349 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||| |||||||| || || || || | ||| | || ||||| ||| Sbjct 7350 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 7409 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||||| | |||||||| | || || |||| Sbjct 7410 ATCTTGGTCTTTACATTGT--CGATCGTGTCGGAGCTCTCCACCTCAAGAGTGATGGTCT 7467 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||| ||||| || ||||| Sbjct 7468 TGCCGGTGAGGGTCTTGACGAAAATCTGCAT 7498 Score = 127 bits (140), Expect = 1e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| |||||| |||||||||||||||| || ||| | || ||| Sbjct 7518 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 7577 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||| |||||||| ||||| ||||| | ||| | || ||||| ||| Sbjct 7578 AACTGCTTGCCGGCGAAGATCAATCGCTGTTGATCCGGAGGAATGCCCTCCTTGTCCTGG 7637 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | || ||||| | | || || || | || || |||| Sbjct 7638 ATCTTGGTCTTTACATTGT--CGATCGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCT 7695 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||| |||||||| ||||| Sbjct 7696 TGCCGGTGAGGGTCTTGACGAAGATCTGCAT 7726 Score = 125 bits (138), Expect = 5e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| ||| |||||||||||||||||| || | ||| || |||| || Sbjct 12770 ACCAAATGAAGTGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCGTCTTCG 12711 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| |||||||| || || || || | ||| | || ||||| ||| Sbjct 12710 AGCTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 12651 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||||| | | |||||||| | || || || || | || || ||||| Sbjct 12650 ATCTTGGTCTTCACATTGTCGATGGTGTCTGAAGACTCGACTTCAAGGGTGATTGTCTTG 12591 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||| |||||||| ||||| Sbjct 12590 CCGGTGAGGGTCTTGACGAAGATCTGCAT 12562 Score = 123 bits (136), Expect = 2e-23 Identities = 156/211 (74%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||||| ||| ||||||||| |||||||| || | || ||| |||| || Sbjct 6835 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCG 6894 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || |||||||| || ||||| || | || | || ||||| ||| Sbjct 6895 AGCTGCTTGCCCGCGAAGATCAATCGTTGCTGGTCCGGGGG-ATGCCCTCCTTGTCCTGA 6953 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | |||||||| | ||||||||||| | || || |||| Sbjct 6954 ATCTTCGTCTTGACATTGT--CAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCT 7011 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || ||||||||||| ||||| || ||||| Sbjct 7012 TGCCGGTGAGGGTCTTGACGAAAATCTGCAT 7042 Score = 122 bits (134), Expect = 6e-23 Identities = 153/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| |||||| ||||||||||| |||| ||| ||| |||| ||| Sbjct 12314 ACAAGGTGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCC 12255 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||| ||||| | ||||| || || | || | ||| ||||| || Sbjct 12254 AACTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCCG-GGGGATACCCTCCTTGTCTTGG 12196 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | || ||||| | ||| || || || | || || ||||| Sbjct 12195 ATCTTCGTCTTCACGTTGTCGATCGTGTCTGAGGACTCGACTTCAAGAGTGATTGTCTTG 12136 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||| ||||| |||||||| ||||| Sbjct 12135 CCGGTGAGCGTCTTGACGAAGATCTGCAT 12107 Score = 111 bits (122), Expect = 1e-19 Identities = 156/214 (73%), Gaps = 9/214 (4%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA---GTTGGCGCTCGTCG 44185 |||| ||| | ||| |||||| ||||||||||| |||| || ||| | || |||| Sbjct 12087 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAAGGGTTCG-GC-CGTCC 12030 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 || |||||||| ||||| ||||| | |||||||| || | ||| | || ||||| || Sbjct 12029 TCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCT 11970 Query 44246 GTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCG 44303 ||||| ||| || ||| | || ||||| | ||||| || || | || || | Sbjct 11969 TGGATCTTGGTCTTGACATTGT--CGATCGTGTCTGATGATTCAACTTCGAGTGTGATGG 11912 Query 44304 TCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||| || ||||||||||| |||||||| ||||| Sbjct 11911 TCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 11878 Score = 104 bits (114), Expect = 2e-17 Identities = 144/200 (72%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| || ||| ||||||||||||||||||||||| || ||| |||| || Sbjct 11858 ACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 11799 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||| | |||||||| || | ||| | || ||||| || Sbjct 11798 AGTTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 11739 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| || ||| | |||||||| | || || ||||| | || || |||| Sbjct 11738 ATCTTGGTCTTGACATTGT--CAATGGTGTCTGAAGACTCAACCTCAAGGGTGATGGTCT 11681 Query 44307 TTCCCGTGAGGGTCTTCACG 44326 | || || || ||||| ||| Sbjct 11680 TGCCAGTCAGAGTCTTAACG 11661 Score = 96.9 bits (106), Expect = 2e-15 Identities = 141/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| ||| | ||| |||||| ||||||||||| |||| ||| || |||| || Sbjct 7746 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 7805 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||| || | ||| | || ||||| || Sbjct 7806 AGCTGCTTTCCGGCGAAGATAAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTATCTTGG 7865 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||||||||| ||| || ||||| | || || ||| || Sbjct 7866 ATCTTTGTCTTGACGTTGTCAATGGTGTCGGAGGACTCAACCTCAAGGGTGATGGTC-TT 7924 Query 44309 CCCGTGAGGGTCTTCACG 44326 | || || ||||| ||| Sbjct 7925 GCAGTCAGAGTCTTGACG 7942 >seq359 Length=210429 Score = 127 bits (140), Expect = 1e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| |||||| ||||||||||| |||| ||| ||| |||| || Sbjct 42513 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGAGTGCGACCGTCCTCG 42454 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | |||||| || || | || | ||||||||| ||| Sbjct 42453 AGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGG 42394 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | |||| ||||| || || ||||| | || |||||||| Sbjct 42393 ATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTG 42334 Query 44309 CCCGTGAGGGTCTTCACG 44326 || ||||||||||| ||| Sbjct 42333 CCGGTGAGGGTCTTGACG 42316 >seq312 Length=215048 Score = 116 bits (128), Expect = 3e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||| ||||| || || |||||| ||||||||||| || | || || |||| || Sbjct 143697 CACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTC 143638 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 |||||||| ||||| ||||| | ||||| || || | || | ||||||||| ||| Sbjct 143637 GAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGTGGGATACCTTCCTTGTCCTG 143578 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 || || ||| | | | |||| ||||| || |||||||| | || || ||||| Sbjct 143577 GATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTT 143518 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||||| |||||||| |||||||| |||||| || Sbjct 143517 ACCCGTCAGGGTCTTGACGAAGATCTGCATGCTG 143484 >seq296 Length=257219 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || ||| || |||||||||||||| |||| || || |||| || Sbjct 193601 ACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCG 193542 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||| || || |||| || | || ||||| || Sbjct 193541 AGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGGGGGATGCCCTCCTTGTCTTGG 193482 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||| ||| | | | || ||||||| ||| || ||||| | || || ||||| Sbjct 193481 ATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTG 193422 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 || ||||| ||||| || ||||| ||||||||| Sbjct 193421 CCTGTGAGTGTCTTGACAAAGATCTGCATGATG 193389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359988794217822