Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq214 120 4e-22 seq908 102 1e-16 >seq214 Length=80960 Score = 120 bits (132), Expect = 4e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 24131 CAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGT 24190 ||| || || || ||| ||| ||||||||||||| || || | |||||||| || || Sbjct 11511 CAAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGT 11570 Query 24191 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAA 24250 ||| |||||||| || |||||||| || ||||| || ||||| || || || || || || Sbjct 11571 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAA 11630 Query 24251 GAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 ||| || || ||||| || |||||||||| Sbjct 11631 GAAGATACCCTCTACGGCAGCAAAGGCAA 11659 >seq908 Length=183814 Score = 102 bits (112), Expect = 1e-16 Identities = 212/316 (67%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 53951 TCAAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 54010 || |||||||| || | |||| | | || || || || | || ||||||| |||| Sbjct 170475 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGAC 170416 Query 54011 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 54070 |||||||||| | | ||||| ||||| || | || || |||||||| || || Sbjct 170415 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATCCAAAGGGCGTAGAAG 170356 Query 54071 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 54130 || || | || || ||||| || || ||||| | || ||||||||| | | Sbjct 170355 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 170296 Query 54131 ATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCC 54190 | ||||| ||||| || || | ||| |||| | | || || || ||||| || ||| Sbjct 170295 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCC 170236 Query 54191 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGAT 54250 || || | ||| | ||||||||| || | || | | ||| || | ||||| || || Sbjct 170235 TGGTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAG 170176 Query 54251 GCACCATTGGTCCCGG 54266 |||| || || |||| Sbjct 170175 ACACCGTTAGTTCCGG 170160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593708716241280