Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq214 221 1e-52 seq725 138 1e-27 seq1576 132 5e-26 seq1017 131 2e-25 seq694 131 2e-25 >seq214 Length=80960 Score = 221 bits (244), Expect = 1e-52 Identities = 340/480 (71%), Gaps = 4/480 (1%) Strand=Plus/Minus Query 116952 ACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG 117011 ||||||| ||||| || || |||||| | |||||||||||||| |||||||||||| Sbjct 11752 ACGCCATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAGTGGGCCCTGCGCTGGATCA 11693 Query 117012 CCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCT 117071 || | || || |||| | |||||||||||| ||||| || ||||| ||||| ||| Sbjct 11692 ACGACGAGGACTCCACCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCT 11633 Query 117072 TCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCC 117131 |||| || ||| ||||||| |||| || ||||||||||| || || ||||||||||| | Sbjct 11632 TCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTC 11573 Query 117132 TGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTT 117191 | || ||| ||||||||||||| | | |||||||||||||| ||||||||| || | Sbjct 11572 TCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGCTTGCT 11513 Query 117192 TGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCG 117251 |||| |||| || | | |||| ||| | | | ||| | ||| | ||| Sbjct 11512 TGCTCTTCAGCCACCTCAAGAAGCGGCCGCACCCCGATGTCGTTCTGCGCATCATTGCCG 11453 Query 117252 ACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC-TGCCGGTGCGTCTGCTGGGA 117310 | | ||| |||| |||||| ||||| ||||| || | | || || | | || | || Sbjct 11452 AGTCTGTCACCATTGAGCAGGCTTTCCTGACCGATGCTCTTCCCTGTTCAT-TGATCGGC 11394 Query 117311 CTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGA 117369 | || || || ||| || |||||||| || ||||| ||| | |||||| | | Sbjct 11393 ATGAA-CGCACGACTTATGAGCCAGTACATCGAATTTGTCGCTGACCGACTGCTGGTAGC 11335 Query 117370 GCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTGGACTTTATGAACCTCATCTC 117429 || | || |||||||||||| | | || || | ||||| ||| | |||||| Sbjct 11334 CCTCGGGAACGAGAAGCACTACAACGCCACAAATCCCTTCGACTTCATGGAGAACATCTC 11275 Score = 208 bits (230), Expect = 8e-49 Identities = 189/235 (80%), Gaps = 5/235 (2%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| ||||||||||| | ||||||| | ||||| Sbjct 12147 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACCTT 12088 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||||| | ||||||||| | ||||||||||||||||| || ||||||| Sbjct 12087 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTCATCAGC 12028 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| || || || |||||||| || ||||||||||||||||| || |||||||| Sbjct 12027 CACGTCCTCGCATTCTTCGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGAGCGG 11968 Query 116813 TTC-GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 ||| |||||| |||| |||| || ||||| || |||||||||||||| || ||| Sbjct 11967 TTCAGCTCAG-AGGTCCAGGCAGCAGAGGCTCGATGCTTCTACGGCTTCCAAATC 11914 >seq725 Length=189678 Score = 138 bits (152), Expect = 1e-27 Identities = 153/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| || ||| | | Sbjct 145870 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 145811 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || |||| ||||| |||||||||||| |||||||| Sbjct 145810 GACACCATTGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 145751 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| ||| ||||| ||||| || || | ||||| ||| ||||||||| Sbjct 145750 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTCTCTGACTACAAC 145691 Query 40870 ATCCAGAAGGAGGCCACGCTGCAT 40893 || || |||||| |||| || ||| Sbjct 145690 ATTCAAAAGGAGTCCACTCTTCAT 145667 Score = 138 bits (152), Expect = 1e-27 Identities = 155/205 (76%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| |||||| | | Sbjct 150893 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTCGAATCATCA 150952 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| || |||| ||||| |||||||| || ||||||| Sbjct 150953 GACACCATCGACAACG-TGAAGACGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCA 151011 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || ||| | |||| ||||||||| ||||| || |||| |||||||| |||||||| Sbjct 151012 ACAGCGATTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCGGACTACAA 151071 Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893 ||| || |||||| |||| || ||| Sbjct 151072 CATTCAAAAGGAGTCCACTCTTCAT 151096 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| || ||| | | Sbjct 146554 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCA 146495 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | ||||| || || | ||||| ||||||||||| ||||||| Sbjct 146494 GACACGATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAA 146435 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| || || ||||| || |||| || |||||| |||||||||| Sbjct 146434 CAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAAC 146375 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| |||| Sbjct 146374 ATCCAGAAGGAGTCCACATTGCA 146352 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || ||||| |||| ||||| | | Sbjct 150665 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCA 150724 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| || || | ||||| |||||||| || |||||||| Sbjct 150725 GACACCATTGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCAG 150784 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| ||||| ||||| || |||| |||||||| || |||||| Sbjct 150785 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACCCTTTCTGATTACAAC 150844 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| |||||| |||| || || || || Sbjct 150845 ATCCAAAAGGAGTCCACTCTTCACCTTGT 150873 Score = 125 bits (138), Expect = 7e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || || || ||||| ||||||||| |||| || || || | |||| | | | Sbjct 146771 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGA 146712 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | ||||| || || | ||||| ||||||||||| ||||||| || || ||||| Sbjct 146711 CAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCAT 146652 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| ||||| || || || |||| |||||||| ||| ||||||||||| ||||| Sbjct 146651 CTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGGA 146592 Query 40881 GGCCACGCTGCA 40892 | |||| ||||| Sbjct 146591 GTCCACACTGCA 146580 Score = 123 bits (136), Expect = 3e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| || || | || Sbjct 146098 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACACTCGAGGTGGAGAGCTCC 146039 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||| || || | ||||| |||||||| || ||||||| Sbjct 146038 GACACGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAA 145979 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 |||||| | |||| ||| ||||| ||| |||| || | |||||||| ||| |||||| Sbjct 145978 CAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAAC 145919 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| |||| || || Sbjct 145918 ATCCAGAAGGAGTCCACTCTTCA 145896 Score = 122 bits (134), Expect = 9e-23 Identities = 151/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| || ||||| |||| ||||| | | Sbjct 146326 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCA 146267 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | ||| ||| || | ||||| |||||||| || ||||||| Sbjct 146266 GACACCATTGATAACG-TGAAGACAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCA 146208 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||||| ||| ||||| ||| |||| || | |||||||| || ||||| Sbjct 146207 ACAGCGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGATTACAA 146148 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| ||| |||| || || Sbjct 146147 CATCCAGAAAGAGTCCACCCTTCA 146124 Score = 122 bits (134), Expect = 9e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || || || ||||| ||||||||| |||| || || || | |||| | | Sbjct 150448 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA 150507 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | ||||| || || | ||||| ||||||||||| |||||||||| || || || Sbjct 150508 CAATGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTTAT 150567 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 | ||| || || ||||| || |||| || |||||| ||||||||||||||||||||| Sbjct 150568 TTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGA 150627 Query 40881 GGCCACGCTGCA 40892 | |||| |||| Sbjct 150628 GTCCACATTGCA 150639 >seq1576 Length=101731 Score = 132 bits (146), Expect = 5e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| ||||||||| |||| || || || || Sbjct 30079 ATGCAGATCTTTGTCAAGACACTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 30138 Query 40750 GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | || |||| ||||| || || | ||||| ||||||||||| | ||||| Sbjct 30139 GACACGATTGACAACG-TCAAGACCAAGATCCAAGACAAGGAGGGCATCCCACCAGACCA 30197 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||| ||||||| ||| ||||| ||||| || |||| || || || ||||||||| Sbjct 30198 ACAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAA 30257 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| || || |||| || || || || Sbjct 30258 CATCCAAAAAGAATCCACCCTCCACCTCGT 30287 >seq1017 Length=42706 Score = 131 bits (144), Expect = 2e-25 Identities = 144/192 (75%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 40701 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA 40760 ||| || || ||||| ||||| || |||||| |||| ||||| | ||||| | | | Sbjct 11396 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGA 11337 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 | ||||| || || | ||||| || || || ||| ||||||| || || ||||| Sbjct 11336 CGCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAACAGCGTCTCAT 11277 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| ||||| ||||| || |||| ||||||||| ||||||||||||||||||||| Sbjct 11276 CTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGA 11217 Query 40881 GGCCACGCTGCA 40892 | |||| || || Sbjct 11216 GTCCACTCTTCA 11205 >seq694 Length=64764 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || || |||||| |||| || || | || Sbjct 29764 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 29705 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 ||| | | | | ||||| ||||| | ||||| || || |||||| ||||||| Sbjct 29704 GACTCCATCGACGCCGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCCCCGGACCAA 29645 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || |||||||||| ||| ||||| ||||| || |||| || || || ||||||||| Sbjct 29644 CAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAAC 29585 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || || ||| | ||| || | || || Sbjct 29584 ATCCAGAAGGAGTCGACTCTCCACCTCGTGCTTCGCCTGCGTGGTGG 29538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515208019743360