Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq725 140 3e-28 seq1576 109 5e-19 seq1017 102 7e-17 seq694 95.1 1e-14 >seq725 Length=189678 Score = 140 bits (154), Expect = 3e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||| ||||| ||||| |||||||||||| | ||||| |||||| Sbjct 146574 ACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 146633 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || ||| ||||||||||||| || || ||||| ||||||||||||||| Sbjct 146634 AGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 146693 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | |||| |||||||| | ||| ||||||| ||| | || ||| Sbjct 146694 ATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 146753 Query 118710 CCGGTCAGAGTTTTTAC 118726 || |||||||| || || Sbjct 146754 CCAGTCAGAGTCTTAAC 146770 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || |||||||| || ||||||||||| | ||||| |||||| Sbjct 146118 ACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCCTCC 146177 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 | ||| || || ||| ||||||||||||| || || ||||| ||||||||||||||| Sbjct 146178 AACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 146237 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || ||| || || | || | |||||| | ||||||||| |||| || | || ||| Sbjct 146238 ATCTTTGTCTTCACGTTATCAATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTG 146297 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| || || || || || |||||||| Sbjct 146298 CCGGTGAGGGTCTTGACGAAGATCTGCAT 146326 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| ||||| ||||||||||| | ||||| ||||||||||| || || Sbjct 150861 GTGGACTCCTTTTGGATGTTGTAATCAGAAAGGGTGCGTCCGTCCTCGAGCTGCTTGCCG 150802 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| ||||||| |||||||| || ||||| ||||||||||||||| || || || Sbjct 150801 GCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTG 150742 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | || | |||||| | ||||||||| |||| || | || |||||||| || || Sbjct 150741 ACATTGTCAATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTGCCGGTGAGGGTC 150682 Query 118722 TTTACAAAAATCTGCAT 118738 || || || |||||||| Sbjct 150681 TTGACGAAGATCTGCAT 150665 Score = 123 bits (136), Expect = 2e-23 Identities = 149/199 (75%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||| ||||| || || |||||||| ||| | || || |||||| Sbjct 150645 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 150586 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 ||||| ||||| ||| | || ||||||||||| || ||||| ||||||||||||| ||| Sbjct 150585 AGCTGCTTTCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 150526 Query 118649 AATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 | | || || || || | |||| ||||||| | ||| ||||||| ||| | || | Sbjct 150525 A--TCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCT 150468 Query 118708 TGCCGGTCAGAGTTTTTAC 118726 |||| |||||||| || || Sbjct 150467 TGCCAGTCAGAGTCTTGAC 150449 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||||||| | ||||| |||||| Sbjct 145890 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 145949 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 | ||| || || ||| |||| | || || || || ||||| ||||||||||||| ||| Sbjct 145950 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 146009 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 | || | ||| || | |||| ||||| | |||||| ||||||| || | || || Sbjct 146010 ATCTTGGTCTTT-ACATTGTCGATCGTGTCGGAGCTCTCCACCTCGAGTGTGATGGTCTT 146068 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| ||||| || || || |||||||| Sbjct 146069 GCCGGTGAGAGTCTTCACGAAGATCTGCAT 146098 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || ||||| |||||||||||||| || | |||||| ||| ||| Sbjct 145662 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCG 145721 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| | |||||||| || || || |||||||||||||| | Sbjct 145722 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 145781 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | || | |||||| | || | || ||||||| || | || || Sbjct 145782 ATCTTCGTCTTGACATTGTCAATGGTGTCTGATGAT-TCCACCTCGAGTGTGATGGTCTT 145840 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || || |||||||| Sbjct 145841 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | ||| ||||| || || |||||||| ||| | || || |||||| Sbjct 146346 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 146405 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| ||||| ||| |||| || ||||| || || ||||| ||||||||||||||| Sbjct 146406 AGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 146465 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| ||||| | || | || || |||| || | || || Sbjct 146466 ATCTTGGTCTTGACATTGTCGATCGTGTCTGATGAT-TCAACTTCGAGTGTGATGGTCTT 146524 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || || |||||||| Sbjct 146525 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 146554 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || ||||| |||||||||||||| || | ||||| || ||| Sbjct 151101 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCG 151042 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || || ||| |||| | ||||| || || ||||| |||||||||||||| | Sbjct 151041 AGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 150982 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCG-TGCTCTCGACCTCGACGGTCACCGTTTT 118708 || || || || | |||| |||||| | || | |||||||||| || | || || Sbjct 150981 ATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGAT-TCGACCTCGAGTGTGATGGTCTT 150923 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||||| || || || || || |||||||| Sbjct 150922 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 150893 >seq1576 Length=101731 Score = 109 bits (120), Expect = 5e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || || |||||||| |||||||| ||| | || || || |||||||| Sbjct 30282 GTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTG 30223 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 || || ||| |||||||||| || || || || || ||||||||||||||| || || Sbjct 30222 CTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCCTCCTTGTCTTGGATCTT 30163 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | ||||| | | ||| ||||||| ||| | || ||||| || Sbjct 30162 GGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCTGT 30103 Query 118715 CAGAGTTTTTACAAAAATCTGCATG 118739 || || || ||||| ||||||||| Sbjct 30102 GAGTGTCTTGACAAAGATCTGCATG 30078 >seq1017 Length=42706 Score = 102 bits (112), Expect = 7e-17 Identities = 144/199 (72%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||||| || || |||||||| ||| | ||||| |||||| Sbjct 11199 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCG 11258 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTGT 118648 ||||| || || ||| ||||||||||||| || || || || || || ||||||| ||| Sbjct 11259 AGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGG 11318 Query 118649 AATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 | | || || || || |||| || ||| | ||||||||||| ||| | ||| | Sbjct 11319 A--TCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCT 11376 Query 118708 TGCCGGTCAGAGTTTTTAC 118726 ||||||| || || || || Sbjct 11377 TGCCGGTGAGGGTCTTGAC 11395 >seq694 Length=64764 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/213 (71%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||| | ||||| || ||||| || || |||||||| || | ||| || ||||| Sbjct 29555 CACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTC 29614 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGT-CTG 118647 |||||| || || ||| ||||||| ||||| || || || || || || ||||||| ||| Sbjct 29615 GAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTG 29674 Query 118648 TAATTTTTTGT-TTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 | |||| || || || |||| || ||| | ||| ||||||| ||| | || Sbjct 29675 GA--TTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTC 29732 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 118739 || || ||||| || || || || ||||||||| Sbjct 29733 TTACCCGTCAGGGTCTTGACGAAGATCTGCATG 29765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433821221233312