Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq725 134 2e-26 seq694 111 2e-19 seq546 89.7 6e-13 >seq725 Length=189678 Score = 134 bits (148), Expect = 2e-26 Identities = 171/233 (73%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 42952 ATTGTCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAAT 43011 |||| || || | | ||| | |||||||| | ||| |||||||||||| ||||| | Sbjct 145639 ATTGGCCACCGCGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGT 145698 Query 43012 CAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGG 43071 ||| ||||| || | || || |||||||| || ||||| || | |||||||||||| | Sbjct 145699 CAGAGAGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCG 145758 Query 43072 CCGGCACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGAT 43130 || | || |||||||||| ||| | || || |||| | | | ||||| ||| Sbjct 145759 GGGGGATGCCCTCCTTGTCC-TGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGAT 145817 Query 43131 TCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||||| |||| |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 145818 TCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 |||||||| | ||| |||||||||||| ||||| || | || || || |||| || Sbjct 151101 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCG 151042 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || ||||| || | |||||| ||||| | || | || |||||||||| || Sbjct 151041 AGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCC-TG 150983 Query 43095 ATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 43153 | | || || | ||| | | | ||||| ||||| || |||| |||||||| || Sbjct 150982 AATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCGACCTCGAGTGTGATGGTCTT 150923 Query 43154 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 ||| || || ||||| || ||||| ||||| Sbjct 150922 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 150893 Score = 105 bits (116), Expect = 8e-18 Identities = 141/195 (72%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || |||||||||| || || || |||| || |||||||| || ||||| Sbjct 150856 CTCCTTTTGGATGTTGTAATCAGAAAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAA 150797 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| ||||||||||| | || | || ||||||||| ||| || |||| | Sbjct 150796 GATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATT 150737 Query 43112 CGCCACCGTGTC---GCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 43168 | | ||||| |||| || || |||| ||||| || ||||| || || ||||| Sbjct 150736 GTCAATGGTGTCTGAGCTC---TCGACTTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTT 150680 Query 43169 TACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 150679 GACGAAGATCTGCAT 150665 Score = 104 bits (114), Expect = 3e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 42975 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 43034 ||||| ||||||||| |||||| || || ||||| || | || || || |||| || Sbjct 150645 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 150586 Query 43035 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 43094 |||||||| || ||||| || || ||||||||||| | || | || |||||||||| | Sbjct 150585 AGCTGCTTTCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 150526 Query 43095 ATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154 || || |||| | | | ||||| || || || |||| |||||||| ||| Sbjct 150525 ATCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 150466 Query 43155 CCCGTTAGCGTCTTTAC 43171 || || || ||||| || Sbjct 150465 CCAGTCAGAGTCTTGAC 150449 >seq694 Length=64764 Score = 111 bits (122), Expect = 2e-19 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | ||||| || |||| || |||||||| || ||||| Sbjct 29573 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 29632 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGA--GC 43109 ||||||||||| ||||| | || | | ||||||||| |||||| |||| || Sbjct 29633 GATGAGTCGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGC 29692 Query 43110 GTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTT 43169 |||| | | |||| || ||||| |||| ||||| || || ||||| || ||||| Sbjct 29693 GTCG--ATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTG 29750 Query 43170 ACAAAGATTTGCAT 43183 || ||||| ||||| Sbjct 29751 ACGAAGATCTGCAT 29764 >seq546 Length=809 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 60066 CTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 60125 |||| || | ||||||||||||| ||||| |||||||||||||||| ||||| |||||| Sbjct 785 CTCCCCGTCGGGGAATCGAACCCCGGTCTTCCGCGTGACAGGCGGAGATACTGTCCACTA 726 Query 60126 TACTACCGAGGA 60137 ||||| |||||| Sbjct 725 TACTAACGAGGA 714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571805191558080