Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq1576 125 5e-24 seq725 122 6e-23 seq694 105 4e-18 seq1017 100 2e-16 >seq1576 Length=101731 Score = 125 bits (138), Expect = 5e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || ||||| | || |||||| || |||||||||||||| Sbjct 30305 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 30246 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| || | ||||||||| ||||| ||||| || || ||||| || Sbjct 30245 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGG 30186 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | |||| |||| || || || Sbjct 30185 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACC 30126 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||| ||||| || || |||||||||||||| Sbjct 30125 TCGAGGGTGATGGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCAT 30079 >seq725 Length=189678 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||| ||| | ||| || ||||| |||||||| ||||| Sbjct 145872 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 145931 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||||||||||||| ||||| || | || || ||||| || Sbjct 145932 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 145991 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||||| || | | |||| |||| || || Sbjct 145992 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACC 146051 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||||||||| ||||| ||||||||||| Sbjct 146052 TCGAGTGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 146098 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| || || || ||||| |||||||||||||| || ||| |||| Sbjct 146343 AGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 146402 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || ||||| || || ||||| ||||| || | || ||||||||| Sbjct 146403 TCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCT 146462 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | |||| || | ||||| || || | |||||||| Sbjct 146463 TGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTC 146522 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||||||||| || || || ||||||||||| Sbjct 146523 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 146554 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||| || | ||| || || || ||||||||||| || Sbjct 145644 CCACCGCGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAG 145703 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || || | ||||||||| ||||| || | ||||||||||| ||| Sbjct 145704 AGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGGG 145763 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | || | ||||| || Sbjct 145764 ATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACC 145823 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| ||||||||||| || || || ||||||||||| Sbjct 145824 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||| ||| | || |||||||| |||||||| || || Sbjct 146100 CCACCGCGAAGACGGAGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 146159 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || ||| | || |||||||||||||| ||||| ||||| ||||| ||||| || Sbjct 146160 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGA 146219 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| |||||| ||| | | | || | || | ||||| Sbjct 146220 ATGCCCTCCTTGTCTTGGATCTTTGTCTTCACGTTATCAATGGTGTCTGAGCTCTCGACT 146279 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||||||||| || || || ||||||||||| Sbjct 146280 TCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 146326 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || || || ||||||||||| || || ||| |||| || | ||||||||| ||||| Sbjct 151083 TCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAG 151024 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || | ||||| ||||| || | || ||||||||| ||||| ||| | | | Sbjct 151023 ATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGTCTTCACGTTG 150964 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | || | |||||||| || | |||||||| ||||||||||| || || || Sbjct 150963 TCGATGGTGTCTGATGATTCGACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACG 150904 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 150903 AAGATCTGCAT 150893 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | ||| || || || |||||||| || || Sbjct 150891 CCACCGCGAAGACGGAGGACAAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAA 150832 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||||||||| ||||| ||||| ||||||||||| || Sbjct 150831 AGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 150772 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | | || | || | ||||| Sbjct 150771 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAGCTCTCGACT 150712 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||||||||| || || || ||||||||||| Sbjct 150711 TCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 150665 Score = 95.1 bits (104), Expect = 8e-15 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| || || || ||||| |||||||||||||| || ||| |||| Sbjct 150648 AGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 150589 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | |||||| || |||||||| || ||||||||||| || | || ||||||||| Sbjct 150588 TCGAGCTGCTTTCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 150529 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | | || | || | || || || || | |||||||| Sbjct 150528 TGGATCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTC 150469 Query 34358 TTGCCGGTGAGAGTTTTCAC 34377 ||||| || ||||| || || Sbjct 150468 TTGCCAGTCAGAGTCTTGAC 150449 >seq694 Length=64764 Score = 105 bits (116), Expect = 4e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | ||||| ||||| | ||| || ||||| ||||||||||| || Sbjct 29538 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 29597 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| |||| || | ||||||||| ||||| ||||| ||||| ||||| ||| Sbjct 29598 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGG 29657 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | | |||||||| || ||||| ||| | || | || || |||| || || | Sbjct 29658 ATACCTTCCTTGTC--CTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCA 29715 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | ||||| || || || || || || || || ||||||||||| Sbjct 29716 CCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 29764 >seq1017 Length=42706 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | ||| || ||||| |||||||||||||| || || |||| Sbjct 11196 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCC 11255 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| ||||| ||||| ||||| ||| | | |||||||| Sbjct 11256 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCC 11315 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | || | || || |||| ||| ||||| || | ||||| || Sbjct 11316 TGGATCTTGGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTC 11375 Query 34358 TTGCCGGTGAGAGTTTTCAC 34377 ||||||||||| || || || Sbjct 11376 TTGCCGGTGAGGGTCTTGAC 11395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323065164604160