Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq908 123 5e-23 >seq908 Length=183814 Score = 123 bits (136), Expect = 5e-23 Identities = 433/668 (65%), Gaps = 15/668 (2%) Strand=Plus/Plus Query 248833 TTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATT 248892 ||||| || || ||| || ||||| || || | |||||| ||| || || Sbjct 169814 TTCAAGACCCTCGAGCGTTCCTATCTGCTGCGCATCAACGGCAAGGTCGCCGAGCGCCCC 169873 Query 248893 CAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGACATAGA-GAGCGTGCT 248951 || |||||| | |||||||| |||||||| || ||| | | ||| || ||| | | Sbjct 169874 CAACACATGCTCATGCGAGTTGCTGTCGGCATCCACGGGAGTTCCATCGACGAG-GCCAT 169932 Query 248952 CGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACACCGACGCTCTTCAA 249011 ||| || |||| | ||| || | | || |||||| | || || |||||||| Sbjct 169933 CGACACTTACAACCTCATGTCGGAGAAGTACTTCACCCATGCCTCCCCCACCCTCTTCAA 169992 Query 249012 CGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTC 249071 ||| || || |||| ||| || || ||||| || | ||||| | |||||||| Sbjct 169993 CGCTGGCACACCCAACCCTCAAATGTCATCATGCTTCCTGGTCACCATGAAGGACGACTC 170052 Query 249072 TGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTCTAAATTCGCGGGCG 249130 |||| || || || ||||| || || || || | | ||| || || || | Sbjct 170053 AATCGATGGTATCTACGACACCCTCAAGACCTGCGCC-ATGATCAGCAAGACGGCTGGTG 170111 Query 249131 GAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATG 249190 | ||||| ||| | || | |||||| | | || |||||||| || || || | Sbjct 170112 GCATCGGCCTCAACATCCACTGCATCCGTGGTACCGGCTCGTACATTGCCGGAACTAACG 170171 Query 249191 GGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCA 249250 | ||| | | |||||||| || | ||||| ||| | |||||| | | | || Sbjct 170172 GTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCTTCAACAACACCGCTCGCTACGTCG 170231 Query 249251 ACCAGGCCGG------GCGCCGAAAGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACG 249304 |||||| || ||| | | || | |||||||| || | || |||||| Sbjct 170232 ACCAGGGTGGCAACAAGCGTCCA---GGTGCCTTCGCCATCTACATTGAGCCCTGGCACT 170288 Query 249305 CCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGC 249364 | || | || |||||||| ||| | | |||||| ||||||| ||| | |||| | Sbjct 170289 CTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTCCGAGCCC 170348 Query 249365 GTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGTCAAGGCCGACG 249424 |||| |||||||||| ||| ||| || | |||||||||||| || ||| | ||| Sbjct 170349 GTGAGCTCTTCTACGCCCTTTGGATCCCAGACTTGTTCATGAAGCGAGTCGAACAGAACG 170408 Query 249425 GCGATTGGACGCTTCTTTCTCCGTCCGA-CGCCCCGGACCTCATCGATCTACACGGCGCC 249483 | || ||| |||| | | || |||| ||||||| ||| ||| | |||||| | Sbjct 170409 GAGAGTGGTCGCTGATGTGCCCCGCCGAGTGCCCCGG-TCTCGCTGATGTCTACGGCGAC 170467 Query 249484 GACTTCGA 249491 || ||||| Sbjct 170468 GAGTTCGA 170475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073742516750848