Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq214 109 1e-18 seq908 84.2 4e-11 >seq214 Length=80960 Score = 109 bits (120), Expect = 1e-18 Identities = 117/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||||||||| || || || |||||||| || | ||||| ||||| |||||| Sbjct 11660 GTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGG 11601 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | |||| |||||||||| |||||| ||| |||| | ||| Sbjct 11600 CTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGAC 11541 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 || ||||| || ||||||||| ||| |||| || Sbjct 11540 GAGGGTCTGCACACCGACTTTGCTTGCTTGCTCTT 11506 >seq908 Length=183814 Score = 84.2 bits (92), Expect = 4e-11 Identities = 175/261 (67%), Gaps = 0/261 (0%) Strand=Plus/Minus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATA 94838 || || ||||| || ||||| |||||| ||| || || ||| || || || || Sbjct 170125 GTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCGTA 170066 Query 94839 AATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGT 94898 ||||| || || || || | | | | |||||||| || || | ||| || | Sbjct 170065 GATACCATCGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGACATTTGAGGGTT 170006 Query 94899 GACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAG 94958 | ||| ||| || || || |||||||| |||||||| || || | | ||||||||| Sbjct 170005 GGGTGTGCCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAG 169946 Query 94959 ATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018 | || || || ||| | | |||| ||||| ||||||||||| || ||||| Sbjct 169945 GTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCAT 169886 Query 95019 AATCATGTCCTGAGGGCGCTC 95039 | ||||| || |||||||| Sbjct 169885 GAGCATGTGTTGGGGGCGCTC 169865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989561989177880