Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq725 82.4 6e-11 >seq725 Length=189678 Score = 82.4 bits (90), Expect = 6e-11 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 ||||| || | |||| |||||| || | ||||||||||| | || || | || ||| Sbjct 145890 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 145949 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 || || |||||||| || |||||||| ||||| || | || | || || || || | Sbjct 145950 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 146009 Query 43021 ATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTCGACGTCTACCGTTATAGTTT 43078 ||| ||||| || || | | |||||| ||| ||| || || | || || || | Sbjct 146010 ATCTTGGTCTTT-ACATTGTCGATCGTGTCG-GAGCTCTCCACCTCGAGTGTGATGGTCT 146067 Query 43079 TTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | ||||| ||||| ||||| || || ||||| Sbjct 146068 TGCCGGTGAGAGTCTTCACGAAGATCTGCAT 146098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381361531172688