Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq214 120 4e-22 seq908 96.9 5e-15 >seq214 Length=80960 Score = 120 bits (132), Expect = 4e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 ||| || || || ||| |||||||||||| |||| || || | |||||||| || || Sbjct 11511 CAAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGT 11570 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 ||| |||||||| || |||||||| || ||||| || || || || || || || || || Sbjct 11571 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAA 11630 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAA 42209 |||||| || ||||| || |||||||||| Sbjct 11631 GAAGATACCCTCTACGGCAGCAAAGGCAA 11659 >seq908 Length=183814 Score = 96.9 bits (106), Expect = 5e-15 Identities = 184/271 (68%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048 || ||||||| ||||||||||| | | | ||||| ||||| || | || || ||| Sbjct 170430 GGGCACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATC 170371 Query 72049 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 72108 ||||| || || || || | || || |||||| || || ||||| | || Sbjct 170370 CAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGG 170311 Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168 ||||||||| | | | ||||| ||||| || || | ||| ||||| | | || || Sbjct 170310 TCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGA 170251 Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228 || ||||| || ||||| || | ||| | ||||||||| || | || | | ||| || Sbjct 170250 CGCTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGC 170191 Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGG 72259 | ||||| || || |||| || || |||| Sbjct 170190 ACGATACCGTTAGAGACACCGTTAGTTCCGG 170160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671124636279360