Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq908 152 8e-32 seq214 122 1e-22 >seq908 Length=183814 Score = 152 bits (168), Expect = 8e-32 Identities = 315/463 (68%), Gaps = 8/463 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| || || ||||| || | ||| ||||| | || || |||||| | ||| Sbjct 170234 CAGGGTGGCAACAAGCGTCCAGGTGCCTTCGCCATCTACATTGAGCCCTGGCACTCTGAC 170293 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| | | || ||| ||| || |||| |||||| | || Sbjct 170294 GTCTTCGAGTTCCTCGACCTCAGGAAGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAG 170353 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC-AAC--GACGGTGGC 97052 | || || || || ||| | ||||| |||||||||||||| ||| ||| |||| | Sbjct 170354 CTCTTCTACGCCCTTTGGATCCCAGACTTGTTCATGAAGCGAGTCGAACAGAACGGAG-- 170411 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 | ||| || |||||||||| | || |||||||| | ||| || ||||| ||| Sbjct 170412 -AGTGGTCGCTGATGTGCCCCGCCGAGTGCCCCGGTCTCGCTGATGTCTACGGCGACGAG 170470 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTG-AGACGAGTCGATGC 97171 || ||||| ||| | ||||||| ||||| || | | | || ||| | || Sbjct 170471 TTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGGTCG-TGCTCGCCGAACCGTCAAGGC 170529 Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 | | | || ||| | ||| | | ||||||| |||||||| | || | ||| || Sbjct 170530 TCAAAAGCTTTGGTACGCCGTTCTCGAGGCTCAGACGGAGACTGGCAACCCTTTCATGCT 170589 Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291 |||||||| | | || ||||| |||||| || | |||||||||||| |||| Sbjct 170590 TTACAAGGACGCTGCTAACCGCAAGTCGAACCAAAAGAACCTCGGCACCATCAAGTGCTC 170649 Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334 || ||||||||||| || | |||||| | ||||||| ||| Sbjct 170650 TAACCTGTGCACGGAGATCATGGAGTACAGCGCTCCGGATGAG 170692 >seq214 Length=80960 Score = 122 bits (134), Expect = 1e-22 Identities = 220/318 (69%), Gaps = 8/318 (3%) Strand=Plus/Minus Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315 |||||| | ||||| || | ||||| || || |||| ||||||||||| || Sbjct 11831 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 11772 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCC-GTCTATACGTAAAAAGGC 125374 || || | || ||||| |||| || || || | || ||| | | |||| ||| Sbjct 11771 CAGCGCGAGTAC---CTCTTCGACGCCATGGAGACCATTCCCGTCGTCAAGCAAAA-GGC 11716 Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434 | |||| | || |||||| | ||||| | || | | ||||| | ||||| || Sbjct 11715 CGAGTGGGCCCTGCGCTGGATCAACGACGAGGACTCCACCTTTGCCGAGCGCCTGGTTGC 11656 Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494 || || ||||||||||| |||||||| || || ||| || ||||||| |||||||| Sbjct 11655 CTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAA 11596 Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 |||||| || ||||||||||| || || | |||||| | || ||||||||||| Sbjct 11595 GAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGGG 11536 Query 125555 CCTACACTGTGACTTTGC 125572 || ||| |||||||| Sbjct 11535 TCTGCACACCGACTTTGC 11518 Score = 118 bits (130), Expect = 2e-21 Identities = 184/252 (73%), Gaps = 11/252 (4%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| ||||| |||| || || ||||||| ||| ||| |||| || Sbjct 12147 ATCTGGCAAATGTACAAGAAGGCAGAGGCATCGTTCTGGACGGCCGAGGAGATCGACCTT 12088 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||| || |||| ||||| | |||| || | |||||| | || || Sbjct 12087 TCCAAGGACATGCACGACTGGGACAACAAGTTGAACGACAACGAGCGACACTTCATCAGC 12028 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||| | | || ||||| |||| || ||||| ||||||||||| || || || || || Sbjct 12027 CACGTCCTCGCATTCTTCGCCGCGTCAGATGGCATCGTCAACGAGAACCTCGTCGA-GCG 11969 Query 125198 ATTC-TCTCAAGAGTTGACCATTC--CAGAGGTGTCG-TGCTTTTACGGATTCCAAATCA 125253 ||| ||| |||| | ||| | |||||| ||| ||||| ||||| |||||||||| Sbjct 11968 GTTCAGCTC-AGAG--GTCCAGGCAGCAGAGG-CTCGATGCTTCTACGGCTTCCAAATCA 11913 Query 125254 TGAT-TGAGAAC 125264 |||| |||| || Sbjct 11912 TGATGTGAGTAC 11901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741043119015360