Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq725 104 5e-17 seq694 96.9 8e-15 >seq725 Length=189678 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || |||||||| ||||| | || ||||| || || || || Sbjct 145674 GTGGACTCCTTTTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCGAGCTGCTTGCCG 145733 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||| || || || || || || || || ||||||||||| | || Sbjct 145734 GCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGTCTTG 145793 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || | ||| ||||| ||||| || ||||| || || || || Sbjct 145794 ACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTC 145853 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 145854 TTGACGAAGATCTGCAT 145870 Score = 104 bits (114), Expect = 5e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || || ||||| || ||||| || || || | |||||||| || || || || Sbjct 151089 GTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCC 151030 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | |||||| || ||||| || || || || ||||||||||| | || Sbjct 151029 GCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGTCTTC 150970 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| || | ||| ||||| ||||| || ||||| || || || || Sbjct 150969 ACGTTGTCGATGGTGTCTGATGATTCGACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTC 150910 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 150909 TTGACGAAGATCTGCAT 150893 >seq694 Length=64764 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || ||||| || || ||||| || ||||| | ||||| Sbjct 29552 AAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTC 29611 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || || || || || || | |||||| || || || || ||||| || || Sbjct 29612 CTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGGATACCTTCCTTGTC 29671 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| || || | || || || | || ||| || || ||||| || || ||||| Sbjct 29672 CTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGT 29731 Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 |||||| || || || || || || |||||||| Sbjct 29732 CTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 29764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151372790021088