Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq725 114 1e-20 >seq725 Length=189678 Score = 114 bits (126), Expect = 1e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTC 48576 || |||||||| ||| |||||||||||||||||| |||| | | || || | || || Sbjct 145662 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAGAGAGTG-CGGCCATCTTC 145720 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| ||| || | || || |||||||| ||| || | | ||||||||| Sbjct 145721 GAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTG 145780 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 ||| ||| ||||| | | ||||| || | || ||| ||||| ||| ||||| || Sbjct 145781 AATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTT 145840 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||||||| || || || || |||||||| Sbjct 145841 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTC 48576 || |||||||| ||| |||||||||||||||||| || | || || || |||| || Sbjct 151101 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCG-AAAGGGTGCGGCCGTCTTC 151043 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 |||||||| || || | || || ||||| || ||| || | | ||||||||| Sbjct 151042 GAGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 150983 Query 48637 AATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 ||| ||| ||| | | | || ||||| || | || || ||||| ||| ||||| Sbjct 150982 AATCTTCGTCTTCACGTTGTCG--ATGGTGTCTGATGATTCGACCTCGAGTGTGATGGTC 150925 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || |||||||| || || || || |||||||| Sbjct 150924 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 150893 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTC 48576 || || ||||| ||| |||||| || ||||||||||| | || || || | ||||| Sbjct 145890 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGA-AAGGGTGCGGCCATCCTC 145948 Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636 || |||||| ||| || | || || || || || ||| || | | ||||||||| Sbjct 145949 CAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTG 146008 Query 48637 AATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTT 48696 || || ||| | | | || || |||| |||| ||||| ||| ||||| || Sbjct 146009 GATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCGAGTGTGATGGTCTT 146068 Query 48697 ACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 ||||||||||| ||||| || |||||||| Sbjct 146069 GCCGGTGAGAGTCTTCACGAAGATCTGCAT 146098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421242287377736