Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq662 165 1e-36 >seq662 Length=65677 Score = 165 bits (182), Expect = 1e-36 Identities = 174/228 (76%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 16447 CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCG 16506 ||||| |||||| || ||||||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 30688 CAGAT-TCTTCGTGACAACATCCAAGGTATCACTAAGCCCGCAATCCGCCGTCTCGCTCG 30630 Query 16507 TCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAA 16566 ||||||||| ||||||||| |||| || | |||| || |||| || | ||| | || Sbjct 30629 TCGTGGTGGTGTCAAGCGTATCTCCGGTCTCATCTACGACGAGACCCGCGGTGTCCTCAA 30570 Query 16567 GATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAA 16626 | |||||||| || |||| || | ||| | || ||| ||||||||||| || || || Sbjct 30569 GCTCTTCCTCGAGTCCGTCATTCGTGACTCAGTCACCTACACCGAGCACGCCAAGCGCAA 30510 Query 16627 GACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCG 16674 ||||||||| || | || ||||||| || | || || || ||||| Sbjct 30509 GACTGTCACTTCTCTCGACGTCGTCTACGCTCTCAAGCGCCAGGGCCG 30462 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79073612763048