Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq214 143 3e-29 seq908 114 2e-20 >seq214 Length=80960 Score = 143 bits (158), Expect = 3e-29 Identities = 121/149 (81%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 33300 CAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGT 33359 ||| || || || ||| ||||||||||||||||| || || || |||||||| || || Sbjct 11511 CAAGCAAGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGT 11570 Query 33360 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAA 33419 ||| |||||||| || |||||||| || ||||| || ||||| ||||| || || || || Sbjct 11571 GAGACCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAA 11630 Query 33420 GAAGATTCCTTCTACTGCAGCAAAGGCAA 33448 |||||| || ||||| ||||||||||||| Sbjct 11631 GAAGATACCCTCTACGGCAGCAAAGGCAA 11659 >seq908 Length=183814 Score = 114 bits (126), Expect = 2e-20 Identities = 215/316 (68%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 63138 TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGAC 63197 ||||||||||| || | |||| | | || || || || | || ||||||| |||| Sbjct 170475 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGAC 170416 Query 63198 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63257 |||||||||| | | ||||| ||||| || | || || |||||||| || || Sbjct 170415 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATCCAAAGGGCGTAGAAG 170356 Query 63258 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63317 || || | || || ||||| || || ||||| | || ||||||||| | | Sbjct 170355 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 170296 Query 63318 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCC 63377 | ||||| ||||| || || | ||| ||||| | | || || || ||||| || ||| Sbjct 170295 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACCC 170236 Query 63378 TGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGAT 63437 || || | ||| | ||||||||| || | || | | ||| || | |||||||| || Sbjct 170235 TGGTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAG 170176 Query 63438 ATACCATTGGTACCGG 63453 | ||| || || |||| Sbjct 170175 ACACCGTTAGTTCCGG 170160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622933682045760