Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq725 95.1 1e-14 seq1576 89.7 4e-13 >seq725 Length=189678 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 ||||| || | || ||| |||| || ||| || ||||||||||| | ||||| Sbjct 146758 ACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGACAATGTCAAGACC 146699 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 ||||| ||||| || ||||| ||||| || |||||| | || || | || ||||||| Sbjct 146698 AAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCATCTTCGCCGGCAAG 146639 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCAT 24194 |||||||| || | | | | | | |||||| ||||| ||||| || || ||| | || Sbjct 146638 CAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGGAGTCCACACTGCAC 146579 Query 24195 TTAGT 24199 || || Sbjct 146578 TTGGT 146574 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | ||||| |||||| ||||| || ||||| || || || || Sbjct 145810 GACACCATTGACAATGTCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 145751 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | || ||||||||| |||||||||| | | | || || || ||| Sbjct 145750 CAGCGATTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTCTCTGACTACAAC 145691 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| || || || ||||||| || Sbjct 145690 ATTCAAAAGGAGTCCACTCTTCATTTGGT 145662 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | || || |||||| ||||| || ||||| ||||| || ||| Sbjct 150953 GACACCATCGACAACGTGAAGACGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAA 151012 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | || |||||||| |||||||| | | | | | | || || ||| Sbjct 151013 CAGCGATTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCGGACTACAAC 151072 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| || || || ||||||| || Sbjct 151073 ATTCAAAAGGAGTCCACTCTTCATTTGGT 151101 >seq1576 Length=101731 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || ||| | || || || | || ||| |||| || ||| || | Sbjct 30079 ATGCAGATCTTTGTCAAGACACTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 30138 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | ||||| ||||| ||||| || ||||| || || || ||| Sbjct 30139 GACACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAA 30198 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || || | || ||||||||| |||||||| | | ||| | ||| || ||| Sbjct 30199 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAAC 30258 Query 24171 ATTCAAAAAGAATCTAC 24187 || ||||||||||| || Sbjct 30259 ATCCAAAAAGAATCCAC 30275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429926903629080