Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq725 105 5e-18 seq1576 86.0 5e-12 >seq725 Length=189678 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 16705 TTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTC 16764 ||| || || || || | || |||| ||| || |||||||||||||| ||||||||||| Sbjct 151123 TTAGCCACCACGAAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTC 151064 Query 16765 GGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | | ||| | |||| || | || |||||||| | || | |||||||||||| Sbjct 151063 CGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCCGG 151004 Query 16825 AGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC 16884 ||| | |||||| ||||| ||| | | |||||| | | | | ||||| | || Sbjct 151003 AGGAATGCCCTCCTTGTCCTGAATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTC 150944 Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||| || ||||| || || ||||| || |||||||| Sbjct 150943 GACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 150893 Score = 104 bits (114), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||| ||||||||||| || ||||||||||||| | |||| | ||||| Sbjct 150648 AGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 150589 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842 || | || || || || ||||||| ||||| |||||| ||| | |||||| |||| | Sbjct 150588 TCGAGCTGCTTTCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCC 150529 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||| | ||| || | | | | |||||| || ||| || | ||||||||| Sbjct 150528 TGGATCTTGGT-CTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGT 150470 Query 16903 TTTTCCGGTCAGCGTTTTGAC 16923 || || ||||| || ||||| Sbjct 150469 CTTGCCAGTCAGAGTCTTGAC 150449 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||| ||||||||||| || ||||||||||||| | |||| | ||||| Sbjct 146343 AGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCC 146402 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | || || || || | ||||| |||||||||||| ||| | |||||| ||||| Sbjct 146403 TCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCT 146462 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||| | ||| || | | | | ||||| | || ||| | |||||||| Sbjct 146463 TGGATCTTGGT-CTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGT 146521 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||| || |||||||| Sbjct 146522 CTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 146554 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/201 (72%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| |||||||||||||| |||||||| |||| | ||| | ||||| Sbjct 146571 AGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCC 146630 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 || | ||| ||||| || | || || |||||||||||| ||| | |||||| ||||| Sbjct 146631 TCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCT 146690 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||| | ||| || | | | | ||||| || ||| || | ||||||||| Sbjct 146691 TGGATCTTGGT-CTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGT 146749 Query 16903 TTTTCCGGTCAGCGTTTTGAC 16923 || || ||||| || || || Sbjct 146750 CTTGCCAGTCAGAGTCTTAAC 146770 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || |||||||| |||| | ||| | | ||| Sbjct 145887 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCC 145946 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842 ||||| || ||||| || | || | || ||||||||| ||| | |||||| |||| | Sbjct 145947 TCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCC 146006 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||| | ||| || | | | | |||||| | |||| || | |||||||| Sbjct 146007 TGGATCTTGGT-CTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCGAGTGTGATGGT 146065 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || || || || |||||||| Sbjct 146066 CTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 146098 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/214 (70%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || |||||||| || || |||||||| || | | ||| | | ||| Sbjct 146115 AGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCC 146174 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 ||||| || ||||| || | || || |||||||||||| ||| | |||||| ||||| Sbjct 146175 TCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCT 146234 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || |||| |||||| | | | ||||| | ||| ||| | ||||| | Sbjct 146235 TGGATCTTTG--TCTTCACGTTATCAATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAG 146292 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || ||||| || || ||||| || |||||||| Sbjct 146293 TCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 146326 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || |||||||||||||| |||||||| || | | ||| ||||||| | || Sbjct 150867 TGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAAAGGGTGCGTCCGTCCTCGAGCTGC 150808 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC-GGCAATTTG 16851 ||||| || | || || ||||| |||||| ||| | |||||| ||||| | | ||| Sbjct 150807 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTG 150748 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 | ||| || | | | | ||||| | ||| ||| | ||||| || || ||||| Sbjct 150747 GT-CTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTGCCGGT 150689 Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935 || || ||||| || |||||||| Sbjct 150688 GAGGGTCTTGACGAAGATCTGCAT 150665 >seq1576 Length=101731 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||| || ||||| ||||||||||||| | ||| | |||| || | || Sbjct 30281 TGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTGC 30222 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC-GGCAATTTG 16851 ||||| || | || || || |||||||| || | |||||| ||||| | | ||| Sbjct 30221 TTGCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCCTCCTTGTCTTGGATCTTG 30162 Query 16852 CTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGT 16911 | ||| || | | | | |||||| || ||| || | ||||||||| || || || Sbjct 30161 GT-CTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCTGT 30103 Query 16912 CAGCGTTTTGACAAAAATCTGCAT 16935 || || |||||||| |||||||| Sbjct 30102 GAGTGTCTTGACAAAGATCTGCAT 30079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405079429350640