Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq725 107 2e-18 seq1576 96.9 3e-15 seq1017 95.1 1e-14 seq694 95.1 1e-14 >seq725 Length=189678 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || | ||||| ||||||| ||| || Sbjct 146326 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCA 146267 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | || ||||| ||| ||| ||||| || || ||||| || ||||| Sbjct 146266 GACACCATTGA-TAACGTGAAGACAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACCA 146208 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || |||||||| || || || |||| ||||| | |||||||| Sbjct 146207 ACAGCGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGATTACAA 146148 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||| ||||| || || || || || Sbjct 146147 CATCCAGAAAGAGTCCACCCTTCACTTGGTCCT 146115 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || |||||||| |||| || || || || Sbjct 150893 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTCGAATCATCA 150952 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| | || | ||| ||||| || || ||||| || ||||| Sbjct 150953 GACACCATCGACAACGTGAAGACGAAGATTCAG-GACAAGGAGGGCATTCCTCCGGACCA 151011 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || ||||| || | ||||| | ||||| | || ||||| Sbjct 151012 ACAGCGATTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCGGACTACAA 151071 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||||| || ||||| || ||||| || || Sbjct 151072 CATTCAAAAGGAGTCCACTCTTCATTTGGTCCT 151104 Score = 102 bits (112), Expect = 7e-17 Identities = 145/202 (72%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || |||||| |||| || || ||||||| |||| || ||||| || ||||| ||||| Sbjct 146770 GTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGA- 146712 Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128 || || ||| || ||| ||||| || || || || || ||||||||||| | | Sbjct 146711 -CAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTCA 146653 Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188 | || |||||||| ||| | || || | ||||| | ||||||||| || ||||| | Sbjct 146652 TCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAGG 146593 Query 25189 AATCCACGCTACATTTAGTGCT 25210 | ||||| || || || || || Sbjct 146592 AGTCCACACTGCACTTGGTCCT 146571 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || |||||||| ||||||| || || || Sbjct 146554 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCA 146495 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| ||||| || || || || || |||| Sbjct 146494 GACACGATCGA--CAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACC 146437 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| |||| || ||||| || || | || || | || || | ||| |||| Sbjct 146436 AACAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACA 146377 Query 25177 ATATTCAAAAAGAATCCAC 25195 | || || || || ||||| Sbjct 146376 ACATCCAGAAGGAGTCCAC 146358 Score = 84.2 bits (92), Expect = 2e-11 Identities = 132/187 (71%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || |||||| |||| || || ||||||| |||| || ||||| || ||||||||||| Sbjct 150449 GTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA- 150507 Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128 || || ||| || ||| ||||| || || || || || ||||| ||||| ||| Sbjct 150508 -CAATGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTTA 150566 Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188 |||| ||||| || || | || || | || || | ||| ||||| || || || | Sbjct 150567 TTTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGG 150626 Query 25189 AATCCAC 25195 | ||||| Sbjct 150627 AGTCCAC 150633 >seq1576 Length=101731 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || || ||||||| |||| || ||||| || Sbjct 30079 ATGCAGATCTTTGTCAAGACACTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 30138 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| || ||| ||||| || || || ||||| |||||| Sbjct 30139 GACACGATTGACAACGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCACCAGACCAA 30198 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || | || || |||||||| || | ||||| | || || | ||| ||||| Sbjct 30199 CAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACAAC 30258 Query 25179 ATTCAAAAAGAATCCACGCTACA 25201 || |||||||||||||| || || Sbjct 30259 ATCCAAAAAGAATCCACCCTCCA 30281 >seq1017 Length=42706 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| | ||||| || | ||||| |||| || |||||||| ||| | ||||| Sbjct 11395 GTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGAC 11336 Query 25071 TCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATT 25130 | | ||| || ||| ||||| ||||| ||||| || ||||||||||| | || Sbjct 11335 GCCGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAACAGCGTCTCATC 11276 Query 25131 TTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAA 25190 || |||||||| || | || || | |||||| | ||| ||||| || || || || Sbjct 11275 TTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGGAG 11216 Query 25191 TCCACGCTACATTTAGTGCT 25210 ||||| || || || || || Sbjct 11215 TCCACTCTTCACTTGGTCCT 11196 >seq694 Length=64764 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||| ||||| | ||||| |||| |||||||| || Sbjct 29764 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 29705 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||| | ||||| | | ||| |||||| ||||| ||||| || || || |||||| Sbjct 29704 GACTCCATCGACGCCGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCCCCGGACCAA 29645 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | || || | || ||| | || ||||| Sbjct 29644 CAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAAC 29585 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || | ||||| Sbjct 29584 ATCCAGAAGGAGTCGACTCTCCACCTCGTGCT 29553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433318831862840