Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq214 109 1e-18 seq912 100 6e-16 seq908 98.7 2e-15 >seq214 Length=80960 Score = 109 bits (120), Expect = 1e-18 Identities = 285/430 (66%), Gaps = 10/430 (2%) Strand=Plus/Plus Query 251566 AAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCA 251625 ||||| || | |||||| | ||| ||||| |||||||||||||||||| |||||||| Sbjct 11251 AAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTGTGGCG 11310 Query 251626 TTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATAC 251685 ||||| ||||| | || || ||||| | | ||||| || ||||| || | ||| Sbjct 11311 TTGTAGTGCTTCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCGATGTAC 11370 Query 251686 TGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAAT 251745 || | ||| ||| | ||||||||| |||| ||| |||| || || | ||| Sbjct 11371 TGGCTCATAAGTCGTGCGTTCATGCCGATCAATGAACAGGGAAGAGCATCGGTCAGGAAA 11430 Query 251746 TCCTTTTCGTTGGCAACTGCCTCCTCCACAAT-TGC----CTTCACCTGTGCCAGAGACA 251800 ||| || ||| || | ||| | | || || | || | | | | | | Sbjct 11431 GCCTGCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGGGG--TGCGGCC 11488 Query 251801 GCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGC 251860 |||| || | | || || ||| | |||| | ||||||||||||||| | Sbjct 11489 GCTTCTTGAGGTGGCTGAAGAGCA--AGCAAG-CAAAGTCGGTGTGCAGACCCTCGTCTC 11545 Query 251861 GACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGA 251920 | ||||||| ||||||||| | || || ||||| | ||||| ||| ||||||||| Sbjct 11546 GGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGAGCCAGA 11605 Query 251921 AGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGC 251980 |||| | | || || || ||||| | | |||||| || | | ||||| |||| Sbjct 11606 AGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAAGGCAACCAGGC 11665 Query 251981 GCTCAGCAAA 251990 |||| ||||| Sbjct 11666 GCTCGGCAAA 11675 >seq912 Length=59113 Score = 100 bits (110), Expect = 6e-16 Identities = 664/1051 (63%), Gaps = 79/1051 (8%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| |||| ||||| | ||||| ||||| || |||| |||||||| || ||| Sbjct 35769 GGTGAGGACTTGTGCAACTGTCAGTTCTCTCTCGCCTACGGTGCCAAGATTCTTCTCAAC 35710 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 | || ||| | |||||||||| |||| || |||||| || | ||| || | Sbjct 35709 ACCGCCACTCTCCGCCTCAAGCGTGGTCACCGTTACGGTCTCTGTGGCCGCAACGGTTCC 35650 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| || || |||||||||||| ||||||||| | || || || ||| | Sbjct 35649 GGCAAGTCTACCCTCATGCGCGCCATTCAGAACGGTCAGGTCGAGGGTTTCCCTTCGCCC 35590 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCACT 279584 ||||| | ||| ||| || |||||||| |||| | | || ||| || | Sbjct 35589 GACGAGGTTCGCACATGGTACGTCGAGCACGATCTCGA-TGGT-TCCGAGGGAGAGATGT 35532 Query 279585 G--TGTTCGACTTCCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCTGAGGAAA 279642 | || |||| | | | | | ||| | | | | | ||||| ||||| Sbjct 35531 CCATTTTGGACTACATCATGACCGACGACCGCCTCAGCGT------CTCTCGGGAGGAGG 35478 Query 279643 TCATCCAGAAACTGGAGGCCAATGGTTTTGATGAAA---GAATGCGTAATCTGCCAGTAG 279699 | || | || | || | || || || ||| || | | |||| ||| | | Sbjct 35477 CCGTCAGCACCCTTGCGGAGATGGGCTTCGACGAAGTTCGACAGGG--ATCTCCCA-TCG 35421 Query 279700 GTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTG 279759 || || || ||||| |||||||||||||| || ||| | || ||| | || | | Sbjct 35420 CCTCCCTCTCTGGTGGCTGGAAGATGAAGCTCGCTCTCGCCCGTGCCGTGCTCTTCAAGG 35361 Query 279760 CCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGC 279819 |||| | || || || |||||||| ||||||||| ||||| | |||| | || ||| Sbjct 35360 CCGACATTCTCCTCCTCGATGAGCCCACCAACCACTTGGACGTCGTCAACATCGCTTGGA 35301 Query 279820 TAGTGTCCTACCTAACCA--GTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTC 279877 | |||||| |||| |||| || ||| | || ||||||| || |||||||| Sbjct 35300 TCACCAACTACCTCACCAACGTCTCAA--ATGCCACCGCCATCATTGTGTCGCACGACTC 35243 Query 279878 TGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGC-----AAAATCTGAAG 279932 | ||||| || ||| ||| | | ||| | ||| | | | || ||| ||| Sbjct 35242 TCAATTCCTCGACAACGTCTGCACGGACATTCTCCACCTTAACCGCTTCAAGATC--AAG 35185 Query 279933 C--TCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCCG 279990 | | ||| ||| ||| ||||||| ||||| || |||||||| | Sbjct 35184 CGTTATCC--------CGGTAACTTGTCTGCCTTCGTTGCTCGTGTTCCTGAGGCCAAGG 35133 Query 279991 CCTACTATGACCTGAA---------GGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAG 280041 ||||| || || || |||| || | |||| ||||| || || Sbjct 35132 CCTACGCCGAGCTCAACACCGGTGAGGACTACAGCTTCAAGC-----TTCCC-GACCCGC 35079 Query 280042 GGTTTCTGGAGGGCATCA-----CATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGT 280096 |||| || || ||| | | | | | |||| || | ||| | |||| ||| Sbjct 35078 CACTTCTCGACGGTGTCAAGACGCGTGAGAAG-TCGC----TCGTTAAGATGCGTGACGT 35024 Query 280097 CTCCTTTGCTTATCCCAATGGCCCCAACATCTTCAGC---AGTGTCAACTC---GCAGGT 280150 || || || ||| | |||| || | ||| | || || | ||| |||| | Sbjct 35023 CTGGTTCCAATACCCCGGTACCCCCGAC--CCTCAACTCAAGGGT-ATCTCCATGCAGCT 34967 Query 280151 TTCTATGAACTCACGGATTGGTGTCATT---GGACCCAATGGTGCGGGTAAGTCTACCCT 280207 ||| || || || || || |||| || ||||| ||| | || ||||| || || Sbjct 34966 GTCTTTGTCGTCGCG---TGTTGCCATTCTCGGTCCCAACGGTTCCGGCAAGTCGACGCT 34910 Query 280208 AATCAAAGTCCTGACTGGCGAGACCCAGGCCACTGAGGGGTCCGTT-TGGAAGCATCCCA 280266 |||| || || ||| || || |||||| ||| ||| | | |||||||| |||| Sbjct 34909 CGTCAAGCTCATGGTTGGTGACACAGAGGCCAA-GAGTGGTGAGGTGTGGAAGCACCCCA 34851 Query 280267 ACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACA 280326 || || || | |||||||| || |||||||||||||||||||| | ||| |||||| Sbjct 34850 ACTTGGTTATCGGATACGTCGCCCAACACGCTTTCCACCACATCGACCAGCACTTGGACA 34791 Query 280327 TGACTCCTAACCAATACATTCAGTGGCGCTA 280357 ||| ||| | | ||||| |||||| || Sbjct 34790 AGACCCCTCTCGACTACATGTTGTGGCGATA 34760 Score = 86.0 bits (94), Expect = 1e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739 ||||| || | ||||| ||| | ||| ||| || ||||| ||||| ||||||||| Sbjct 34355 GGTCTCGAGCGTGAGTTCACATCGCACAACACCATGCGTGGTCTCTCTGGTGGCCAGAAG 34296 Query 280740 GTCAAACTTGTCATCGGAGCAGCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAG 280799 ||||| |||| |||| || || |||| | || ||| | |||| ||||||||| Sbjct 34295 GTCAAGATTGTGCTCGGTGCCGCAACATGGCGTAAGCCCCACATTGTCGTCCTCGACGAG 34236 Query 280800 CCTACCAACTATCTGGACCGCGAGAGCCTG--GGCGCTC 280836 || ||||||| ||||||| ||| |||| ||||||| Sbjct 34235 CCCACCAACTTCTTGGACCGTGAGTCCCTGGCGGCGCTC 34197 >seq908 Length=183814 Score = 98.7 bits (108), Expect = 2e-15 Identities = 175/247 (71%), Gaps = 14/247 (6%) Strand=Plus/Minus Query 293127 GACAAAGGCACCACGATCAGCAGCGAGGTCAATCACTGTCTTCATAGAGATCTCCCACGA 293186 || ||||||||| || || ||||| | ||| || | |||| |||||||||||| Sbjct 171493 GATAAAGGCACCTCGGTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACAC 171434 Query 293187 TGTCTTGTACACTGCCTTGACATCAGG--ATGAATGCCAATAACCTTCTGGATAGACCCT 293244 ||||||||||| ||||||| || || ||||||| || |||||||| || || Sbjct 171433 TGTCTTGTACAGTGCCTTG--ATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCG 171376 Query 293245 CCGTTGGCAATAATCTGGTTCTTCAT-TGTCTCGGACCA-AGTCC---CACGAGCAATGA 293299 |||| ||| || || |||||||||| ||| ||| ||| || || | ||| || | Sbjct 171375 CCGTGGGCTATGATGCGGTTCTTCATCTGT-TCGTTCCACAGACCTTGCTCGA-CA---A 171321 Query 293300 GCTCGCGGACAAGGTAAGAGTTGACAACGGGGAACTCACCAGCGAGAGTGCGACGGCTGT 293359 |||| || | || ||| |||||| || ||||||| || ||||| || ||| ||| Sbjct 171320 GCTCACGCAGCAGCCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGT 171261 Query 293360 AAATGTT 293366 ||| ||| Sbjct 171260 AAAGGTT 171254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027813938339976