Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1576 107 2e-18 seq725 105 6e-18 seq1017 89.7 4e-13 seq694 82.4 6e-11 >seq1576 Length=101731 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||||||||| || | | || | || | || ||||||||||| |||||||| ||| Sbjct 30306 ACCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGA 30247 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | || || ||||| || || || || ||| |||||||||| |||||||| || || Sbjct 30246 TAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGTGG 30187 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 ||||| || ||||| ||||| || | | |||| ||||||| ||| || || Sbjct 30186 GATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTAC 30127 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | ||| | || ||||| || || || || ||||| ||||||||| Sbjct 30126 CTCGAGGGTGATGGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCATG 30078 >seq725 Length=189678 Score = 105 bits (116), Expect = 6e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || || || ||||| |||||||||||| Sbjct 146553 ATACCACCACGCAGGCGGAGGACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCG 146612 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || ||||| || || ||| ||||||||||||||||||||||| Sbjct 146613 GAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGA 146672 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | |||||| | ||| || Sbjct 146673 GGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCA 146732 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTAC 114370 || || | ||| | || ||||| |||||||| || || Sbjct 146733 ACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAAC 146770 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | || || ||||| || ||||||||||| Sbjct 146097 ATACCACCGCGAAGACGGAGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAATCA 146156 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || | || || || ||| ||||||||||||||||||||||| Sbjct 146157 GAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGA 146216 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| |||||| || | | |||| |||||| | | ||| Sbjct 146217 GGAATGCCCTCCTTGTCTTGGATCTTTGTCTTCACGTTATCAATGGTGTCTGAGCTCTCG 146276 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| || || || || || |||||||| Sbjct 146277 ACTTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 146326 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | || ||||| | || || || |||||||||||||| || Sbjct 151119 CCACCACGAAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 151060 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || || ||||| || || || || ||| |||| | |||||||||||||||||| Sbjct 151059 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCCGGAGGA 151000 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| |||||| || | | || | |||||| | |||||||| Sbjct 150999 ATGCCCTCCTTGTCCTGAATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCGACC 150940 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || |||||||| || || || || || |||||||| Sbjct 150939 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 150893 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 || ||||| | || || || |||||||||||||| || | ||| || |||||| Sbjct 145662 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCG 145721 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 || || || || ||| |||| | ||||| |||||||| || ||||| || ||||| | Sbjct 145722 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 145781 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 ||||| || | | |||| |||||| | ||||| || || | || | || ||| Sbjct 145782 ATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTG 145841 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||||| || || || || || |||||||| Sbjct 145842 CCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || ||||| ||||||||||| | || || || || || || || || Sbjct 150861 GTGGACTCCTTTTGGATGTTGTAATCAGAAAGGGTGCGTCCGTCCTCGAGCTGCTTGCCG 150802 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| ||||| ||||||||||||||||| || ||||| ||||| || Sbjct 150801 GCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTG 150742 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | |||| |||||| | | ||||| || | || | || |||||||| || || Sbjct 150741 ACATTGTCAATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTGCCGGTGAGGGTC 150682 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 150681 TTGACGAAGATCTGCAT 150665 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | ||| || || | || || || || || |||||||| ||| Sbjct 146325 ATACCACCACGAAGGCGGAGAACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCG 146384 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || || ||| |||| || ||||||||||||||| Sbjct 146385 GAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGA 146444 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| ||||| || | | || | ||||| | ||||| Sbjct 146445 GGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCA 146504 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| || || || || || |||||||| Sbjct 146505 ACTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 146554 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || || || | | || || || | || || || || || |||||||||||| Sbjct 145869 ATACCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCG 145928 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || | || || || ||| |||| | || |||||||||||| Sbjct 145929 GAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGA 145988 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 |||||||| || ||||| ||||| |||| | || | ||||||| | || Sbjct 145989 GGAATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCC 146048 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | || |||||||| ||||| || || || |||||||| Sbjct 146049 ACCTCGAGTGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 146098 >seq1017 Length=42706 Score = 89.7 bits (98), Expect = 4e-13 Identities = 133/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| ||| | || ||| || || || || || || Sbjct 11211 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCG 11270 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||||||||||||||||||||| ||||| ||||| ||||| ||| || || || Sbjct 11271 GCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGGATC-TTGGTCTT 11329 Query 114306 AGCTG-TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | || ||||| || ||||| || | ||| | ||| |||||||| || || Sbjct 11330 GACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGT 11389 Query 114365 TTTTAC 114370 || || Sbjct 11390 CTTGAC 11395 >seq694 Length=64764 Score = 82.4 bits (90), Expect = 6e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||| || | |||||| || || || || || || Sbjct 29568 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCG 29627 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| ||||||| |||||||||||||| || || ||||| ||||| || ||| || || Sbjct 29628 GCGAAGATGAGTCGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGGAT-TTTGGTCTT 29686 Query 114306 AGCTG-TTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | || ||||| || || || || | ||| | || || || ||||| || Sbjct 29687 GACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGT 29746 Query 114365 TTTTACAAAAATCTGCATG 114383 || || || ||||||||| Sbjct 29747 CTTGACGAAGATCTGCATG 29765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420125511006432