Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq908 473 2e-128 seq214 251 1e-61 >seq908 Length=183814 Score = 473 bits (524), Expect = 2e-128 Identities = 1049/1557 (67%), Gaps = 46/1557 (3%) Strand=Plus/Minus Query 243902 AAGGGCGCC-CGCTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGT 243960 || ||| || || || || |||||| ||||| | ||||||| || ||||| || | || Sbjct 171490 AAAGGCACCTCGGTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACACTGT 171431 Query 243961 CTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTG 244020 |||||| | | ||||| | | ||||| | || | |||||| | |||||| ||| Sbjct 171430 CTTGTACAGTGCCTTGATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCGCCGTG 171371 Query 244021 GACGATGAGCTGGGTGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGAC 244080 | | |||| || | ||| | ||||||||||| || |||| | ||| Sbjct 171370 GGCTATGATGCGGTTCTTCATCTGTTCGTTCCACAGACCTT---GCTCGACAAGCTCACG 171314 Query 244081 CAGGTGCCT---GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTT 244137 ||| ||| ||| || || || ||||| || | ||||| || || ||| ||||| Sbjct 171313 CAGCAGCCAAGGGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTT 171254 Query 244138 GCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGG 244197 ||| || ||||| | || ||| || ||| || ||||| || ||||| || Sbjct 171253 GCTCGTGTAAGGCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGG 171194 Query 244198 CATGGGCGACACCAGCAGACTGTTCCTCACGCCGTGCCTCTGG--ATGCGGAGTCTGAGC 244255 ||| || | | ||| ||| ||| | | ||||| | || ||| | | ||| Sbjct 171193 CATAGGGGCGAGCAGGAGAGAGTTTCGGAGACCGTG--TGCGGCAATGTTGCGCTTGATT 171136 Query 244256 TCGTTCCAGTCCCACATGCCCGAGAGGTCCTC-GCGTTTGAGGCCCCACATGTCAAACTG 244314 ||| ||||||||| | |||| | | | ||| ||||| | || | || Sbjct 171135 TCGGCCCAGTCCCAGA----------GTCCACTGGGAGTGACTCCCCAGAGATCGTATTG 171086 Query 244315 CAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGC 244374 |||| ||||||||| |||||||||||||| ||| ||||| ||| || ||| Sbjct 171085 CAGCTCGCCCTTGCTGGTTGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGC 171026 Query 244375 CAGCTTACAGCTCTCG-TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCA 244433 |||| || | ||| ||||| ||||||| |||||| |||||||||||| |||| | Sbjct 171025 GAGCTCGCA-CGATCGCTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGA 170967 Query 244434 TGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTC 244493 | ||||| | || | ||||| | ||||| |||||||| ||||||| || | Sbjct 170966 GCTTCTTGGCCTCGGGGCTGTCGAAGGCGTAACCCATGATCATGAAAGCGTCGGCGAGAC 170907 Query 244494 CCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGG 244553 | | || ||||| |||||||| | ||| ||| ||||||| | | || ||||| || | Sbjct 170906 CGTTGACTCCGATACCGATGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAG 170847 Query 244554 GGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTGCGGGT---GATCATGCGGACGACGT 244610 |||| ||||| | ||||| | |||||||||||||| || | || || ||| Sbjct 170846 GGTAGTAGTTGACATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGT 170787 Query 244611 CGGCCAGCAGCTGAAAGTCGTAC-TCGTAGGGATCCTCGGCGATGGTGATCCTCACAAAC 244669 | ||| || |||||||| || | | | || | |||| | ||| || | Sbjct 170786 GG---AGCTTCTTGAAGTCGTATGTCCTTGTGTTCGTGTGCGA-GTCGATGTGGACGTAA 170731 Query 244670 TCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGG 244729 || || | ||||| ||||||||||| || ||||| |||| | |||||| Sbjct 170730 GAAGGCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCC 170671 Query 244730 ACAATCTCGGTGCAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTG 244789 | ||||| ||||| |||||| ||||||||||||||| |||| || || || |||||| Sbjct 170670 ATGATCTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTG 170611 Query 244790 GCGTT-GCAGGCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAG 244848 ||| |||| |||||||||| |||||||| || || ||||| ||| || |||| Sbjct 170610 CGGTTAGCAG-CGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAG 170552 Query 244849 GACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTA 244908 ||| || ||| || | ||||||||| || | |||||| ||||| |||||| Sbjct 170551 AACGGCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTA 170492 Query 244909 GCGGGTGTACAGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGC 244968 ||| || |||||||||||| ||| |||| || | || ||||||||| || Sbjct 170491 CTTCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGC 170432 Query 244969 CGGGCACATGAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGAT 245028 |||||||| || |||||| ||| | | ||| | || |||||| | ||| ||||| Sbjct 170431 GGGGCACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGAT 170372 Query 245029 CCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTG--CTCGTCCGAGCCAGTGTTCTTCCTC 245086 ||| ||||| | |||||| || | || ||| | ||| ||| ||| ||||||||| Sbjct 170371 CCAAAGGGCGTAGAAGAGCTCACGGG--CTCGGACCTCCTCCTTGCCGTGGTTCTTCCTG 170314 Query 245087 AGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCG 245146 || || | || || |||||||| |||||||||||| ||||||| |||| ||| || Sbjct 170313 AGGTCGAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCT 170254 Query 245147 GGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAG 245202 || ||||||||||| |||||||| | | | |||||| |||||||| ||| || Sbjct 170253 GGACGCTTGTTGCCACCCTGGTCGA----CGTAGCGAGCGGTGTTGTTGAAGACGCGAAG 170198 Query 245203 GGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCT 245262 ||||||| || ||||||||| ||||| || || ||||| | ||| | || | Sbjct 170197 CATAGGCACGATACCGTTAGAGACACCGTTAGTTCCGGCAATGTACGAGCCGGTACCACG 170138 Query 245263 GAGGTTGCTGATGGACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTT 245322 || | | |||| | ||| | || || || |||| ||| | ||||||| |||| Sbjct 170137 GATGCAGTGGATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTT 170078 Query 245323 GATGGTGTCTGCTATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGA 245382 || |||||| || || || || ||| ||||||| ||| ||| ||||| || || Sbjct 170077 GAGGGTGTCGTAGATACCATCGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGA 170018 Query 245383 CAGCTGGGGCTTGGGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTA 245439 || || || ||||| ||| | |||||| || |||||| ||| ||||| ||||| Sbjct 170017 CATTTGAGGGTTGGGTGTGCCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTA 169961 >seq214 Length=80960 Score = 251 bits (278), Expect = 1e-61 Identities = 418/592 (71%), Gaps = 19/592 (3%) Strand=Plus/Minus Query 42537 GAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTC 42596 |||||| | ||||| ||| ||| || || || |||| ||||| | || |||| Sbjct 11831 GAGAACATTCACTCCGAGACATACTCCCTCCTCATCGACACATACATTCGCGACCCCGCA 11772 Query 42597 GAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGAC 42656 |||| | || ||| | ||||||||||| || ||| | ||||| | ||||| || Sbjct 11771 CAGCGCGAGTACCTCTTCGACGCCATGGAGACCATTCCCGTCGTCAAGCAAAAGGCCGAG 11712 Query 42657 TGGGCGCTCAACTGGATCGA----GAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGC 42712 ||||| || ||||||| | ||| ||| | || || | |||| | ||||| || Sbjct 11711 TGGGCCCTGCGCTGGATCAACGACGAG----GACTCCACCTTTGCCGAGCGCCTGGTTGC 11656 Query 42713 CTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAA 42772 |||| | ||||| ||||| ||||||||||| ||| | ||||||||||||||||||||||| Sbjct 11655 CTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTTTCGCCTCCATCTTCTGGCTCAA 11596 Query 42773 GCAGAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGG 42831 | || ||| || |||||||| ||||||||||| ||||| ||||||||| | ||||||| Sbjct 11595 GAAGCGTGGTCTC-ATGCCCGGTCTCACCTTCTCCAACGAGCTCATCAGCCGAGACGAGG 11537 Query 42832 GGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC-CTCG 42890 | ||||| | |||||||| ||| | || ||| |||||||||| | | ||| | | Sbjct 11536 GTCTGCACACCGACTTTGCTTGCTTGCTCTTC---AGCCACCTCAAGAAGCGGCCGCACC 11480 Query 42891 AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACG 42950 | | | || | | |||||| | ||| | || || ||| ||| ||||| || Sbjct 11479 CCGATGTCGTTCTGCG-CATCATTGCCGAGTCTGTCACCATTGAGCAGGCTTTCCTGACC 11421 Query 42951 CAGTCGCTGCCCGTGTCCCTGGTCGGCATGAAC-CACGACCTCATGTGCAAGTACATCCA 43009 | | || ||| || || ||||||||||| ||||| || ||| || |||||||| | Sbjct 11420 GATGCTCTTCCCTGTTCATTGATCGGCATGAACGCACGA-CTTATGAGCCAGTACATCGA 11362 Query 43010 GTACGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGT 43068 | ||||| |||| || || || | ||| || | | ||||||| | | Sbjct 11361 ATTTGTCGCTGACCGACTGCTGGTAGCCCTCGGGAACGAGAAG-CACTACAACGCCACAA 11303 Query 43069 GCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTT 43120 ||||||||||| ||||||||||||||| || | |||||||| ||||| || Sbjct 11302 ATCCCTTCGACTTCATGGAGAACATCTCGCTGCAAGGCAAGACAAACTTCTT 11251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944318707839360