Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1576 145 2e-29 seq725 127 5e-24 seq694 122 2e-22 seq1017 120 7e-22 seq966 105 2e-17 >seq1576 Length=101731 Score = 145 bits (160), Expect = 2e-29 Identities = 173/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || ||||| || | ||| |||||||||||| || ||||||| Sbjct 30305 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 30246 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || |||||||| | || || || |||||||| ||||| ||||| |||| Sbjct 30245 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGG 30186 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || || ||||| || | || ||||| || || | ||| || ||||| Sbjct 30185 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACC 30126 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTAT 288481 ||||| ||||| ||||| || || || |||||||| || |||||||| ||| ||| Sbjct 30125 TCGAGGGTGATGGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCATGATGATAT 30071 >seq725 Length=189678 Score = 127 bits (140), Expect = 5e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||||||||| | || || | ||||| ||| || ||||| || || ||||| Sbjct 145641 TGGCCACCGCGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCA 145700 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | ||| ||||| || ||||| | || || || |||||||||| ||||| || Sbjct 145701 GAGAGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGG 145760 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || ||||| || |||| || || || || || | || ||||| Sbjct 145761 GGGATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCC 145820 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 145821 ACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || | ||||| ||| || ||||| || || ||||| | Sbjct 151119 CCACCACGAAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAA 151060 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||||| |||||||| || Sbjct 151059 AGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCCGGAGGA 151000 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || |||| |||||||| || || | || ||||| || Sbjct 150999 ATGCCCTCCTTGTCCTGAATCTTCGTCTTCACGTTGTCGATGGTGTCTGATGATTCGACC 150940 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 150939 TCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 150893 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| || || ||||| || | || ||||| |||||| Sbjct 146364 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAG 146423 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || |||||||| ||||| || || || || ||||| || | || || || Sbjct 146424 ATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTG 146483 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || ||||| |||||||| ||||| ||||| ||||| || ||||||||| Sbjct 146484 TCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACG 146543 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 146544 AAGATCTGCAT 146554 Score = 118 bits (130), Expect = 3e-21 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || | |||| ||| ||||| ||||| || || || | Sbjct 146100 CCACCGCGAAGACGGAGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAATCAGAA 146159 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || |||||||| ||||||||||| || Sbjct 146160 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGA 146219 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || || ||||| || | |||||||| || || | || |||| || Sbjct 146220 ATGCCCTCCTTGTCTTGGATCTTTGTCTTCACGTTATCAATGGTGTCTGAGCTC---TCG 146276 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 146277 ACTTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 146326 Score = 109 bits (120), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || || || |||| ||| || |||||||| || || || | Sbjct 150891 CCACCGCGAAGACGGAGGACAAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAA 150832 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||||||||| || | || || || |||||||| || ||||| || || Sbjct 150831 AGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGA 150772 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || || ||||| || | || || || || || | || |||| || Sbjct 150771 ATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTGTCAATGGTGTCTGAGCTC---TCG 150715 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||| ||||| ||||| || ||||||||||| |||||||| Sbjct 150714 ACTTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 150665 Score = 105 bits (116), Expect = 2e-17 Identities = 162/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || || | |||| ||| || || ||||| || || |||| Sbjct 145872 CCACCGCGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAA 145931 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || || || || || |||||||||| || ||||| || Sbjct 145932 AGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGA 145991 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATC---GCTCGATTCT 288423 || || || || |||||||| || | || || || || || | || |||| || Sbjct 145992 ATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTC---TCC 146048 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| ||||| |||||||| ||||| |||||||| Sbjct 146049 ACCTCGAGTGTGATGGTCTTGCCGGTGAGAGTCTTCACGAAGATCTGCAT 146098 Score = 104 bits (114), Expect = 6e-17 Identities = 131/180 (73%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| || || ||||| || | || ||||| ||||| Sbjct 150627 TCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCGAAA 150568 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || |||||||| || ||||| || || || |||||||| || | || || || Sbjct 150567 ATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTG 150508 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || |||| || || || || ||||| ||||| ||||| || ||||||||||||||| Sbjct 150507 TCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTGACG 150448 Score = 100 bits (110), Expect = 7e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || || |||| || ||||| ||||| || | ||| || || |||||| Sbjct 146592 TCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAG 146651 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||||||||| ||||| || || || || ||||| || | || || || Sbjct 146652 ATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATTG 146711 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || || || ||||| ||||| ||||| || ||||||||||| ||| Sbjct 146712 TCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTAACG 146771 >seq694 Length=64764 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | ||| ||||| || | || || || ||||| || ||||| | Sbjct 29538 CCACCACGCAGGCGAAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 29597 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || ||||| || | || || || |||||||| || |||||||| ||| Sbjct 29598 AGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGG 29657 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || ||||||||||| | || ||| || || || ||| || || || Sbjct 29658 ATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACC 29717 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 29718 TCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 29764 >seq1017 Length=42706 Score = 120 bits (132), Expect = 7e-22 Identities = 137/183 (75%), Gaps = 6/183 (3%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||||| ||| ||||| ||||| || | || || || |||||| Sbjct 11217 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAG 11276 Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACG 288399 || ||||||||||| || ||| || ||||| || |||||||| || | || ||| Sbjct 11277 ATGAGACGCTGTTG---GTCCGGGGGAATACCTTCCTTGTCCTGGATCTTGGTCTTGACG 11333 Query 288400 TTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTG 288459 || || || ||| ||| || || ||||| ||||||||||| ||||| || |||||| Sbjct 11334 GCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTG 11393 Query 288460 ACG 288462 ||| Sbjct 11394 ACG 11396 >seq966 Length=49847 Score = 105 bits (116), Expect = 2e-17 Identities = 141/191 (74%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 326140 TTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCA 326198 |||||| |||||||| | ||||| | || |||| ||| | |||||| ||||| | Sbjct 23803 TTGAAGCCCGAGAATCTCTTTGATGTTCT-TGATCTCTGCATTCTTCATGATGGCGTCGT 23745 Query 326199 CGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGC 326258 ||| || ||||||||||| | || |||||||| | ||||||||||| | | || | Sbjct 23744 GGGAAGCTTCGCGGACGTTGAGCAGCTTTCCACGTAACGGGAACACTCCCCAGTTGTCAC 23685 Query 326259 GACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGA 326317 | ||||| ||||||||||| ||| || || | | | || || || |||||||| ||| Sbjct 23684 GTCCGACGACGGACAGCCCACCGACAGC-AGAGGCTTTGGCAGAGTCTCCCTCCGTAAGA 23626 Query 326318 ATGAGAGTGCA 326328 ||||| ||||| Sbjct 23625 ATGAGCGTGCA 23615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179628161537008