Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq912 102 2e-16 seq966 100 6e-16 seq214 84.2 5e-11 >seq912 Length=59113 Score = 102 bits (112), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 334128 TCGGACCCGTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAA--ACATCCGCAGAGGGGA 334185 ||||| || ||||||||||| || ||||| | | | | || | || | || |||| Sbjct 35543 TCGGAACCATCGAGATCGTGCTCGACGTA--CCATGTGCGAACCTCGTCGGGCGAAGGGA 35600 Query 334186 ACCCTTCAAGCTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTG 334245 | || || | |||||||||| ||| |||||||| || || || || || | ||||| Sbjct 35601 AACCCTCGACCTGACCGTTCTGAATGGCGCGCATGAGGGTAGACTTGCCGGAACCGTTGC 35660 Query 334246 GCCCACACAGACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAA 334305 | ||||| |||||||| |||| |||||||| || || | |||| ||||||| Sbjct 35661 GGCCACAGAGACCGTAACGGTGACCACGCTTGAGGCGGAGAGTGGCGGTGTTGAGAAGAA 35720 Query 334306 TTTTTCCACCATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 | || |||| || || ||||| || | ||| | |||| |||||||| Sbjct 35721 TCTTGGCACCGTAGGCGAGAGAGAACTGACAGTTGCACAAGTCCTCACC 35769 >seq966 Length=49847 Score = 100 bits (110), Expect = 6e-16 Identities = 140/191 (73%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 298261 TTGAAGGCCGAGAATTTGTTTGA-GCGCTGTGATTTCTTCGTTCTTCGTGATGCTTGCCA 298319 |||||| |||||||| | ||||| | || |||| ||| | |||||| ||||| | Sbjct 23803 TTGAAGCCCGAGAATCTCTTTGATGTTCT-TGATCTCTGCATTCTTCATGATGGCGTCGT 23745 Query 298320 CGGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGC 298379 ||| || |||||||| || | || |||||||| | ||||||||||| | | || | Sbjct 23744 GGGAAGCTTCGCGGACGTTGAGCAGCTTTCCACGTAACGGGAACACTCCCCAGTTGTCAC 23685 Query 298380 GACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGA 298438 | ||||| ||||||||||| ||| || || | | | || || || |||||||| ||| Sbjct 23684 GTCCGACGACGGACAGCCCACCGACAGC-AGAGGCTTTGGCAGAGTCTCCCTCCGTAAGA 23626 Query 298439 ATGAGAGTGCA 298449 ||||| ||||| Sbjct 23625 ATGAGCGTGCA 23615 >seq214 Length=80960 Score = 84.2 bits (92), Expect = 5e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624 || ||||||||| | ||| ||| | |||||||||||||| || || ||||| | | Sbjct 11399 ATCGGCATGAACGCACGACTTATGAGCCAGTACATCGAATTTGTCGCTGACCGACTGCTG 11340 Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684 | || || || | ||||| |||||| ||| || ||||| | ||| |||||| | Sbjct 11339 GTAGCCCTCGGGAACGAGAAGCACTACAACGCCACAAATCCCTTCGACTTCATGGAGAAC 11280 Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTT 243713 || ||||| ||||| || || |||||||| Sbjct 11279 ATCTCGCTGCAAGGCAAGACAAACTTCTT 11251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102855469191600