Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq908 248 9e-61 >seq908 Length=183814 Score = 248 bits (274), Expect = 9e-61 Identities = 998/1550 (64%), Gaps = 39/1550 (3%) Strand=Plus/Plus Query 93887 CCATGGCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTT 93946 ||||| || |||| ||||| |||||||| || || || || || ||||| || || | Sbjct 169969 CCATG-CCTCCCCCACCCTCTTCAACGCTGGCACACCCAACCCTCAAATGTCATCATGCT 170027 Query 93947 TCCTGATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTG 94006 ||||| | || | |||| |||||| ||| || || | ||||| ||||||| ||| | Sbjct 170028 TCCTGGTCACCATGAAGGACGACTCAATCGATGGTATCTACGACACCCTCAAGACCTGCG 170087 Query 94007 CGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGG 94066 | | ||| || || || || ||||| ||| ||||| | | |||| | | Sbjct 170088 CCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGTACCG 170147 Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 | || ||||| ||| || || || ||| ||||| |||| |||||||| || |||| Sbjct 170148 GCTCGTACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTCGCGTCT 170207 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 |||||||| | || |||||||| ||||||||||| | | | ||| | ||||| Sbjct 170208 TCAACAACACCGCTCGCTACGTCGACCAGGGTGGCAACAAGCGTCCAGGTGCCTTCGCCA 170267 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 |||| | |||||||||||| | ||||| | ||| ||||||| | |||||||||| Sbjct 170268 TCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGAAGAACCACG 170327 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTA 94306 |||| || || | ||| | || ||||||||||| || ||| | |||||| | || | Sbjct 170328 GCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCAGACTTGTTCA 170387 Query 94307 TGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGAC 94366 |||| || ||||| | ||| | ||| || | || ||| || || ||||| | Sbjct 170388 TGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCCGAGTGCCCCGGTC 170447 Query 94367 TGTCCGACGTTTGTGGATCG-CGTTTTGAAGACT-TGTATGCTCGTTACGAATCGCAGGG 94424 | | || || | || || || || || || | || | ||||| |||| Sbjct 170448 TCGCTGATGTCTACGG--CGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGCGTGAGGG 170505 Query 94425 CAAGGC---CAGGAAGGTTATGGATGCTAGGAAGCTGTGGGA-TCAGATCGTGGACGTAC 94480 || | | | || | | ||| ||||| ||| | | | || | || | | Sbjct 170506 TCGTGCTCGCCGAACCGTCA---AGGCTCAAAAGCTTTGGTACGCCGTTC-TCGAGGCTC 170561 Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACC 94540 || |||||| || | || | ||| | | ||||||| ||| ||| |||||| |||| Sbjct 170562 AGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCTAACCGCAAGTCGAACC 170621 Query 94541 AGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTT 94600 | || ||||||| |||||| |||| || |||||||| ||||| | ||||| | Sbjct 170622 AAAAGAACCTCGGCACCATCAAGTGCTCTAACCTGTGCACGGAGATCATGGAGTACAGCG 170681 Query 94601 CTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAG 94660 ||||||| ||| | ||||| || ||||| | | || ||| | ||| ||| | | Sbjct 170682 CTCCGGATGAGGTCGCTGTCTGCAACCTTGCCAGTATGGCTCTGCCTTCTTACGT-CCAC 170740 Query 94661 AT-GCCT---ACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGA 94716 || | || ||||| || | | ||| | || |||| | || || Sbjct 170741 ATCGACTCGCACACGAACACAAGGACATACGACTTCAAGAAGCT------CCACGAGGTT 170794 Query 94717 AGGATGGTC--TTG----AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCG 94770 | | |||| ||| ||||| |||| | | ||||| |||| |||||| || || Sbjct 170795 ACCAAGGTCGTTTGTGGCAACCTCAACAAGATCATCGATGTCAACTACTACCCTGTTCCC 170854 Query 94771 GAGGCGGAGAACTCAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCG 94830 |||||| |||| || ||| || || || |||||||| ||||| ||| | ||| |||| Sbjct 170855 GAGGCGAAGAAGTCCAACATGCGCCACCGCCCCATCGGTATCGGAGTCAACGGTCTCGCC 170914 Query 94831 GACGCGCTGGTGATGATGCGTCTGCCCTACGACTCTGTCGACGCGGCGGGTTTGAATTTG 94890 ||||| | |||| ||| || ||| |||| ||| || | | || | Sbjct 170915 GACGCTTTCATGATCATGGGTTACGCCTTCGACAGCCCCGAGGCCAAGAAGCTCAACATC 170974 Query 94891 AACATATTCGAAAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCG 94950 | || ||||| | || || ||| || | | | ||| | | | |||| | Sbjct 170975 CAGATCTTCGAGACGATCTACCACGCCGCTCTCGAGCGATCGTGCGAGCTCGCCA---AG 171031 Query 94951 GACGGCGGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAAC-AGGGCATTTTTCAGTT 95009 || |||| | |||| | | || || |||| | | ||||| | || | Sbjct 171032 GAGCTCGGGACCTACGAGAC-ATACGAGGGCAGCCCAACCAGCAAGGGCGAGCTGCAATA 171090 Query 95010 CGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCT-ACGCGCTGATG 95068 ||| |||||||| || | ||| || || | ||||||| | | | |||| | Sbjct 171091 CGATCTCTGGGGAGTCACTCCCAGTGGACTCTGGGACTGGGCCGAAATCAAGCGC-AACA 171149 Query 95069 TTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGG 95128 || | ||||||| | |||| | || || | ||||| |||||||| || || || Sbjct 171150 TTGCCGCACACGGTCTCCGAAACTCTCTCCTGCTCGCCCCTATGCCCACTGCTTCGACAA 171209 Query 95129 CGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGC 95188 |||||||| ||| |||||||| || || || | ||| |||| | |||| | | | Sbjct 171210 GTCAGATCCTCGGCTTCAACGAGTGCTTTGAGCCTTACACGAGCAACCTTTACACCCGAC 171269 Query 95189 GGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGA-CCTGACGTCT 95247 | ||||||||||| || |||| ||| ||||| || || || || | || || Sbjct 171270 GTGTGCTCGCCGGCGAGTTCCAAGTCGTCAACCCTTGGCTGCTGCGTGAGCTTGTCG-AG 171328 Query 95248 CTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAG 95307 | ||| ||||| || || | ||||||| | || | | |||||| ||||| Sbjct 171329 CAAGGTCTGTGGAACGAACAGATGAAGAACCGCATCATAGCCCACGGCGGCTCGATCCAG 171388 Query 95308 AACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCG 95367 ||| | || || || || ||||||||| || |||||||| |||||||||||| || Sbjct 171389 AACGTGCCCGGCATTCCCGACCGCATCAAGGCACTGTACAAGACAGTGTGGGAGATCTCG 171448 Query 95368 CAGCGCGTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCA 95417 ||| || || ||||| || |||| ||| || |||| |||||||| Sbjct 171449 CAGAAGGTCATCATCGACATGGCTGCCGACCGAGGTGCCTTTATCTGCCA 171498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494712464506560