Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq908 161 1e-34 seq694 125 7e-24 seq725 111 2e-19 seq1017 102 8e-17 seq1576 89.7 5e-13 >seq908 Length=183814 Score = 161 bits (178), Expect = 1e-34 Identities = 932/1468 (63%), Gaps = 63/1468 (4%) Strand=Plus/Minus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| ||||| |||||||| || | ||| |||| || | ||||| ||| ||| Sbjct 171302 GGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAG 171243 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | |||||| | ||||| ||| || || ||| || | || || ||||| || | Sbjct 171242 GCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGGCATAGGGGCGA 171183 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 || | ||| || || | ||||| || ||||| | ||| | | ||| |||| Sbjct 171182 GCAGGAGAGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATTTCGGCCCAGTCCC 171123 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACACTCCTCGACTGGCGGGAC 153267 | || | || || | ||| | ||||| || | | | || |||| || | Sbjct 171122 AGAGTCCACTGGGAGTGACTCCCCAGAGATCGTATTGCAGCTCGCCCTTGCTGGTTGGGC 171063 Query 153268 TGCCGGCAAACGTACTGTAGCTGCCGT-CGCGTTGGGCCAGTTCGCAGCTAGC-CTCGAG 153325 |||| | | || |||| | ||| | | |||| | || ||||| | | | |||||| Sbjct 171062 TGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGG-CGAGCTCGCA-CGATCGCTCGAG 171005 Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTC 153385 ||| | | ||| || || ||| ||| || | ||||| || || ||| || Sbjct 171004 AGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTCGGGGCTGTC 170945 Query 153386 GTACGGCATG-CGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444 | | ||| | | || | || || |||||||| ||||| | || |||| ||||||| Sbjct 170944 GAA-GGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTCCGATACCGATGG 170886 Query 153445 GTCGATGCTTCTCGTTG-----CTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATC 153499 | || || | |||| || ||||||| | | || |||| ||| ||| Sbjct 170885 GGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACA-----GGGTAGTAGTTGACATC 170831 Query 153500 GATAATTTTGTTGAGGTTGCGCACCACC-ACTTTAGTTATCGCCTTAAGTTTCTCGAAAT 153558 ||| || ||||||||||||| ||| | | || || || | | | | || |||| ||| | Sbjct 170830 GATGATCTTGTTGAGGTTGC-CACAAACGACCTTGGTAACCTCGTGGAGCTTCTTGAAGT 170772 Query 153559 CATAGGTCATT----TCGT--------CGACGCGTACGCATCGATTCACGGCAATAGACG 153606 | || ||| || |||| ||| | | ||| | | || || ||| | Sbjct 170771 CGTATGTCCTTGTGTTCGTGTGCGAGTCGATGTGGACGTAAGAAGGCAGAGCCATACTGG 170712 Query 153607 CCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGT 153666 | || || ||||| || ||| || | ||||||||| || |||||| | ||| |||| Sbjct 170711 CAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGT 170652 Query 153667 TGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATT-GCACGCGTCTTTG 153725 | ||| || ||| ||| | || | || || ||||| || ||| ||||| ||| Sbjct 170651 TAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCA-GCGTCCTTG 170593 Query 153726 AAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGA---CGATAAACCTATGCAGG 153782 | |||||| | || ||| ||||| || | |||| || ||| | || Sbjct 170592 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGC--- 170536 Query 153783 TCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGC 153842 | || || || | ||| || ||||| | |||||| |||||| || | Sbjct 170535 TTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCC 170476 Query 153843 TCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGAC 153902 || ||||||||||||||| || ||||| ||||| |||| || |||||||||||| Sbjct 170475 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGAC 170416 Query 153903 CACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATG 153962 ||| ||| | ||| || |||||||| || || | ||| || ||||| | | Sbjct 170415 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATCCAAAGGGCGTAGAAG 170356 Query 153963 AGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGA-GCACGCTATA 154021 || || || || | |||||| ||| ||| | || | || | || | | | Sbjct 170355 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGA-A 170297 Query 154022 GATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC---TTTCCGCC 154078 || ||| | ||||||||| |||||||||| ||| | ||||||| |||| || || || Sbjct 170296 GACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCACC 170237 Query 154079 CTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGC 154138 ||| ||||||| ||| | | |||||||||||||| | ||| || | | ||| | | Sbjct 170236 CTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGA 170177 Query 154139 GGTGCCGTTGGT---CGAATTGATCTTGC---TGCCGCGGGCGCGCACTTGATGCACGTT 154192 | ||||| || | | || | || | || ||| ||| | ||| ||| Sbjct 170176 GACACCGTTAGTTCCGGCAATGTACGAGCCGGTACCACGG--ATGCAGTGGAT----GTT 170123 Query 154193 AACGCCAATGCCGCC-GCCGTACTT--TGAT-ATGGCAGCGCAGTCGCCCAGCGTCCTGT 154248 | ||| ||||| || ||||| ||| |||| ||| |||||| || || || Sbjct 170122 GAGGCCGATGCCACCAGCCGT-CTTGCTGATCATG---GCGCAGGTCTTGAGGGTGTCGT 170067 Query 154249 AGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAA 154308 |||| || ||||| ||||| | | || || ||| || || ||||||| || Sbjct 170066 AGATACCATCGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGACATTTGAGGGT 170007 Query 154309 TGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCA 154368 || | || || || ||||||||||| || || || || || | ||| | Sbjct 170006 TGGGTGTGCCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGA 169947 Query 154369 TGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCA 154428 | ||| || |||||||| || ||||| | ||||| ||||||| || || |||| Sbjct 169946 GGTTGTAAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCA 169887 Query 154429 TGAGCATGTGCTGCGGACGTTCGGCGAC 154456 |||||||||| || || || |||||||| Sbjct 169886 TGAGCATGTGTTGGGGGCGCTCGGCGAC 169859 >seq694 Length=64764 Score = 125 bits (138), Expect = 7e-24 Identities = 147/196 (75%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | |||||| ||||||||| || || |||| Sbjct 29571 GACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCG 29630 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || |||||||||||||| || |||||||| ||||| || |||| || || | Sbjct 29631 AAGATGAGTCGCTGTTGGTCCGGGGGGATACCTTCCTTGTC-CTGGATTTTGGTCTTGAC 29689 Query 138541 TG-TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | || ||||| ||||||||||||| || | || ||||| ||||| || || Sbjct 29690 GGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTT 29749 Query 138600 TACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 29750 GACGAAGATCTGCATG 29765 >seq725 Length=189678 Score = 111 bits (122), Expect = 2e-19 Identities = 136/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 ||||||||||| |||||||| ||| | || || |||||||||||| || |||| Sbjct 146589 GACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTGCTTGCCGGCG 146648 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAA 138539 |||| |||||||||||||||||||| || || || ||||| ||| || | || | Sbjct 146649 AAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACA 146708 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||| | ||||| ||||||| || | || || ||||||||||| || Sbjct 146709 TTG-TCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTT 146767 Query 138600 TAC 138602 || Sbjct 146768 AAC 146770 Score = 96.9 bits (106), Expect = 3e-15 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 138386 AGCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGC 138445 |||| || || | ||| | || ||||| | | ||||||||||||||||||||||| Sbjct 151121 AGCCACCACGAAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCG 151062 Query 138446 TCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAG 138505 | || || ||| ||||| || || || | |||| | |||||||||||||||| Sbjct 151061 AAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCCGGAG 151002 Query 138506 GTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTC 138563 | || || || ||||| ||| | || || || | ||| || | |||||| | || || Sbjct 151001 GAATGCCCTCCTTGTC-CTGAATCTTCGTCTTCACGTTG-TCGATGGTGTCTGATGATTC 150944 Query 138564 CACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || | || || || || || || || || || |||||||| Sbjct 150943 GACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 150893 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || ||||| | | ||||||||||||||||||||||| Sbjct 145643 GCCACCGCGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 145702 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||| || || ||||| || || |||| |||| | ||||| |||||||| || Sbjct 145703 GAGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGG 145762 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTT--AATTGTTCCACGGTGTCGGTCGACTCC 138564 || || || ||||| ||| | || || || |||| || | |||||| | || ||| Sbjct 145763 GATGCCCTCCTTGTC-CTGAATCTTCGTCTTGACATTG-TCAATGGTGTCTGATGATTCC 145820 Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||||| || | || || || || || || || || || |||||||| Sbjct 145821 ACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 93.3 bits (102), Expect = 4e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||||||| || || |||| Sbjct 150630 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCG 150571 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAA 138539 | || |||||||| ||||||||||| || || || ||||| ||| || | || | Sbjct 150570 AAAATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACA 150511 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | ||||| ||||||| || | || || ||||||||||| || Sbjct 150510 TTG-TCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTT 150452 Query 138600 TAC 138602 || Sbjct 150451 GAC 150449 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||||||| || || |||| Sbjct 146361 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCGAGCTGCTTTCCGGCG 146420 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGAT-TTTTTGTTTTAA 138539 |||| || ||||||||||||||||| || || || ||||| ||| || | || | Sbjct 146421 AAGATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGACA 146480 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||||| | || || || |||| || | || || || || || || || Sbjct 146481 TTG-TCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTT 146539 Query 138600 TACAAAAATCTGCAT 138614 || || |||||||| Sbjct 146540 GACGAAGATCTGCAT 146554 >seq1017 Length=42706 Score = 102 bits (112), Expect = 8e-17 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || ||||||||| || || |||| Sbjct 11214 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCG 11273 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| ||||||||||||||||| || |||||||| ||||| || | || || || | Sbjct 11274 AAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTC-CTGGATCTTGGTCTTGAC 11332 Query 138541 TG-TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | || ||||| |||||| ||||||| || | ||| || || || || || || Sbjct 11333 GGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTT 11392 Query 138600 TAC 138602 || Sbjct 11393 GAC 11395 >seq1576 Length=101731 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||| | || | || | | | || || ||||| |||||||||||| Sbjct 30305 CCGCCACGGAGACGGAGGACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGAT 30246 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||| ||||| || || |||| |||| ||||| |||||||| || || Sbjct 30245 AGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGG 30186 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565 || || || ||||| || | || || || | ||| || | ||||||| ||||| | Sbjct 30185 ATGCCCTCCTTGTC-TTGGATCTTGGTCTTGACGTTG-TCAATCGTGTCGGAGGACTCTA 30128 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 |||||| || | || || || || || || || ||||| ||||||||| Sbjct 30127 CCTCGAGGGTGATGGTCTTGCCTGTGAGTGTCTTGACAAAGATCTGCATG 30078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496251631105920