Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq1297 109 2e-19 >seq1297 Length=17568 Score = 109 bits (120), Expect = 2e-19 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 3639 CTCCATCCGCACGATCGGCAAGGTGATGTCGCCGTCGAGCACCTTGCGTTGCAGCTTCTC 3698 ||| || || |||| |||| || ||| |||||| | ||||||||| |||| |||| Sbjct 16901 CTCGATGCGGACGAGGGGCAGGGCGATCTCGCCGGCCGACACCTTGCGGATCAGCATCTC 16960 Query 3699 AGGGGACAGGTGCGCGAAGTAGTCGCGGCAGACGAGATCGAGGGGGATGACGGCGCGGCC 3758 || | |||||| ||| ||||| |||||||| ||||| | ||||| |||||||| Sbjct 16961 GGGCGTCAGGTGGCTGAAATAGTCCCGGCAGACCAGATCCACCGGGATCACGGCGCGCGG 17020 Query 3759 GTCGTATTGAGCCATCAGAAGGAAAGCGGTGTTCATGG 3796 | |||| || ||||| || | ||| ||||||||||||| Sbjct 17021 GCCGTACTGCGCCATGAGGATGAAGGCGGTGTTCATGG 17058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200558956584096