Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq908 174 2e-38 seq214 120 4e-22 >seq908 Length=183814 Score = 174 bits (192), Expect = 2e-38 Identities = 498/757 (66%), Gaps = 19/757 (3%) Strand=Plus/Minus Query 116440 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAA 116499 || || || || |||| | ||||||| | | ||||||| || || ||||| |||| Sbjct 170712 GCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGG 170653 Query 116500 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 116559 || || | ||| |||||||| | ||||||||| || ||||| |||| || |||||| Sbjct 170652 TTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCAGCGTCCTTG 170593 Query 116560 TAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATC 116618 || ||||| | || | || |||||||| || | || ||||| || | ||| | | | Sbjct 170592 TAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTT 170533 Query 116619 GGCGGCTGGCACAGT--GGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCC 116676 | | || | || || |||| || || ||||| ||||||||| |||||| ||| Sbjct 170532 TGAGCCTTG-ACGGTTCGGCGA--GCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCC 170476 Query 116677 TCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGAC 116736 || ||||| || || | || | ||| || || || | || || | || ||| Sbjct 170475 TCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGAC 170416 Query 116737 CATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAG 116796 || | || || || || ||||||||||| | |||||||||||| || || ||||| Sbjct 170415 CACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATCCAAAGGGCGTAGAAG 170356 Query 116797 AGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG 116856 || || || || | || || | || || || | | || | || || | | Sbjct 170355 AGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAG 170296 Query 116857 ATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCGACG------ACCA 116910 | || | |||||| || || | ||| | |||| | | ||| |||| ||| Sbjct 170295 ACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGA-AGGCACCT--GGACGCTTGTTGCCA 170239 Query 116911 GCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCA 116970 |||||| || || | || || ||| || ||||||||||| || | |||||| | | Sbjct 170238 CCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTA 170179 Query 116971 GATTGGCCATTTGTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCA 117028 || || || || || || |||||| | | | | | || |||||||| | Sbjct 170178 GAGACACCGTTAGTTCCGGCAATGTACGAGCC--GGTACCACGGATGCAGTGGATGTTGA 170121 Query 117029 TACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCC 117088 || || || || ||| ||| ||| ||||| | |||| || ||||||| | Sbjct 170120 GGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATAC 170061 Query 117089 CATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTG 117148 ||||||| ||||| |||| | | || |||||||| |||||||| || | |||| Sbjct 170060 CATCGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGACATTTGAGGGTTGGGTG 170001 Query 117149 TACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 | ||||||||||||||||| || | || ||| |||| Sbjct 170000 TGCCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA 169964 >seq214 Length=80960 Score = 120 bits (132), Expect = 4e-22 Identities = 123/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| ||||||||||| ||| |||||| || || |||||| ||||| Sbjct 11517 AGCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACC 11576 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||||||||| |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 11577 GGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGAT 11636 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679 ||||| || || || |||| || ||||||||||||| Sbjct 11637 ACCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGG 11677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613493886893760