Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq908 163 5e-35 >seq908 Length=183814 Score = 163 bits (180), Expect = 5e-35 Identities = 333/490 (68%), Gaps = 10/490 (2%) Strand=Plus/Minus Query 203845 CACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTCTT 203904 |||||||||||| |||||||| | ||||| | | ||| || ||||| | || ||||| Sbjct 171643 CACCGTGAACTGGATGGCGTTGGCAGCAGGTCGGGTTCGGAGGTAGTATGTTCCCGTCTT 171584 Query 203905 TAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGC 203964 | ||||||| ||| ||||| | ||||||| | || | || | | |||| | Sbjct 171583 CAATCCCTTCTTCCAGCCGTAGAAGTGCATGCTCGTAAGCTGGCCAAAGCTGGGTGCTTG 171524 Query 203965 CATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATAT 204023 | ||| ||||||||| || |||| ||| |||||| || || || || ||||| | Sbjct 171523 GAGGTGGATGTTCAGACTTTGAGATTGGCAGAT-AAAGGCACCTCGGTCGGCAGCCATGT 171465 Query 204024 TGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTGAG 204083 ||| ||| ||||||||| ||||||||||| |||||| ||| | || || | | | Sbjct 171464 CGATGATGACCTTCTGCGAGATCTCCCACACTGTCTTGTACAGTGCCTTGATGCGGTCGG 171405 Query 204084 GCACATCTTCC---CACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTC 204139 | | | || ||||| || |||||||||| || ||| || | | || || || Sbjct 171404 GAA----TGCCGGGCACGTTCTGGATCGAGCCGCCGTGGGCTATGATGCGGTTCTTCATC 171349 Query 204140 TCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGA 204199 | || ||||| || | || ||||| |||| ||| ||||||| || || Sbjct 171348 TGTTCGTTCCACAGACCTTGCTCGACAAGCTCACGCAGCAGCCAAGGGTTGACGACTTGG 171289 Query 204200 AAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCG 204259 || || |||| ||||| | ||||||| | |||||| | ||| | || || || |||| Sbjct 171288 AACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAGGCTCAAAGCACTCG 171229 Query 204260 TTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTG 204319 ||| ||||| |||||| || || |||||||| || || || || || ||||| Sbjct 171228 TTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGGCATAGGGGCGAGCAGGAGAGAGTTT 171169 Query 204320 CGCACACCGT 204329 || | ||||| Sbjct 171168 CGGAGACCGT 171159 Score = 156 bits (172), Expect = 7e-33 Identities = 481/728 (66%), Gaps = 16/728 (2%) Strand=Plus/Minus Query 204883 CTCCACGATCTCGGTGCACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGA 204942 ||||| |||||| ||||||| |||| |||||| | || | | || ||||| || Sbjct 170674 CTCCATGATCTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGA 170615 Query 204943 CTTGCGGTTACAGGAGTCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGA-TC 205001 |||||||||| | ||||||||| | |||||| || | || ||||| |||||| || Sbjct 170614 CTTGCGGTTAGCAGCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTC 170555 Query 205002 GCAGAATGTGGGTCCACAATTCGCGAGCCTCCACT-TGCTTCACGTACATCCCTTGAGAC 205060 | |||| | | ||| | | |||||| || | | | | || |||| | | Sbjct 170554 G-AGAACGGCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACG-C 170497 Query 205061 TCGTATTTTGTGTACAGCGCCACAAAGTCAGAACCGTACACGTCCATCAGCCCTGGACAT 205120 ||||| || ||| || ||| | || || ||||| || || || || || || Sbjct 170496 TCGTACTTCTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCAC 170437 Query 205121 TTTTTGGGACACATCAGAGACCACA-TCTGATCGTCTTTCACCCTCTCCATAAACAGGTC 205179 | ||| |||||||| |||||| || | || | || || | || ||| |||| ||| Sbjct 170436 TCGGCGGGGCACATCAGCGACCACTCTCCGTTC-TGTTCGACTCGCTTCATGAACAAGTC 170378 Query 205180 GCTGATCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTT 205239 |||||| ||| |||| || || |||||||| | | | || | || ||||||| Sbjct 170377 TGGGATCCAAAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTT 170318 Query 205240 TTTCAAGTCCAGCCAAGCCGCA-ATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTG 205298 | | ||| || || || | | ||| | |||||| ||||| | | | ||| | | Sbjct 170317 CCTGAGGTCGAGG-AACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGG 170259 Query 205299 CGCCTGGCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCA 205358 | ||||| | |||||| ||||||||||| || ||||| | |||||| || || | Sbjct 170258 CACCTGGACGCTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAA 170199 Query 205359 GCATCGGCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCC 205418 |||| ||||| | |||||| | | ||||| || | | ||| |||||| | | | Sbjct 170198 GCATAGGCACGATACCGTTAGAGACACCGTTAGTTCCGGCAATGTACGAGCCGGTACCAC 170139 Query 205419 TCACGTTGGAGATGGCCGCGCCAATCCCGCCAGAACACTTGGCGATCTGGGCGCA-CTCT 205477 | | | |||| ||| || || |||| |||| |||| |||||| ||| Sbjct 170138 GGATGCAGTGGATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCT 170079 Query 205478 TGCAGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCACCAGATAGCACGAA 205537 || || ||| |||||| || |||| || |||||| || || ||||| |||| || Sbjct 170078 TG-AGGGTGTCGTAGATACCATCGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGAT 170020 Query 205538 GCCAGCTTGGCAAAGTTG---GTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAG 205594 | || ||| | |||| ||||| |||| |||||| |||||| ||| ||| ||||| Sbjct 170019 GACA-TTTG--AGGGTTGGGTGTGCCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAG 169963 Query 205595 CGCTTCTC 205602 |||||| Sbjct 169962 TACTTCTC 169955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795137945132160