Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq725 149 7e-31 seq1576 136 4e-27 seq694 123 3e-23 seq1017 116 4e-21 >seq725 Length=189678 Score = 149 bits (164), Expect = 7e-31 Identities = 174/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 46359 ATTATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGT 46418 || ||| ||| || | | ||| | |||| ||| | || ||||||||| || |||| Sbjct 145636 ATCATTGGCCACCGCGGAGACGGAGGACCAAATGAAGAGTGGACTCCTTTTGAATGTTGT 145695 Query 46419 AGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGT 46478 |||| || |||||||| | || |||||||||||||||||||| ||||| |||||||||| Sbjct 145696 AGTCAGAGAGAGTGCGGCCATCTTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGT 145755 Query 46479 CGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCG 46538 | | || | || |||||||||| |||||| |||||| | | | ||||| | Sbjct 145756 CCGGGGGGATGCCCTCCTTGTCCTGAATCTTCGTCTTGACATTGTCAATGGTGTCTGATG 145815 Query 46539 ATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||||| || | |||||||| ||||| || || || || || ||||| ||||| Sbjct 145816 ATTCCACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 138 bits (152), Expect = 1e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||||||| |||||| ||||| ||||||||||| || || || |||| ||| Sbjct 146346 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 146405 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| |||||||| || | |||||| ||||| | || | || ||||||||| | Sbjct 146406 AGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 146465 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||||| | | | |||||| ||||| || || | |||||||| ||| Sbjct 146466 ATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTTG 146525 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || || || || || ||||| ||||| Sbjct 146526 CCGGTGAGGGTCTTGACGAAGATCTGCAT 146554 Score = 134 bits (148), Expect = 2e-26 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||||||||| || |||||||| || || ||||| |||| |||||||||||||| ||||| Sbjct 151084 CTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCGAGCTGCTTGCCCGCGAA 151025 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| ||||| ||||| | || | || |||||||||| |||||| |||| | ||| Sbjct 151024 GATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTCGTCTTCA-CGT 150966 Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580 | | | ||||| ||||| || || | |||||||| ||||| || || || || | Sbjct 150965 TGTCGATGGTGTCTGATGATTCGACCTCGAGTGTGATGGTCTTGCCGGTGAGGGTCTTGA 150906 Query 46581 CAAAGATTTGCAT 46593 | ||||| ||||| Sbjct 150905 CGAAGATCTGCAT 150893 Score = 125 bits (138), Expect = 8e-24 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||||||| |||||| ||||| ||||||||||| || || || |||| ||| Sbjct 150645 ACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCG 150586 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 |||||||| |||||||| || | ||||||||||| | || | || |||||||||| | Sbjct 150585 AGCTGCTTTCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGG 150526 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||||| | | | ||||| || || || || | |||||||| ||| Sbjct 150525 ATCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 150466 Query 46565 CCCGTCAGCGTTTTAAC 46581 || ||||| || || || Sbjct 150465 CCAGTCAGAGTCTTGAC 150449 Score = 123 bits (136), Expect = 3e-23 Identities = 145/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||||||||| ||||| || || || ||||| |||| |||||||||||||||||||| Sbjct 150856 CTCCTTTTGGATGTTGTAATCAGAAAGGGTGCGTCCGTCCTCGAGCTGCTTGCCGGCGAA 150797 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || ||||||||| |||||| |||||| | Sbjct 150796 GATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTGGTCTTGACATT 150737 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| || || || | ||||| || ||||| || || || || Sbjct 150736 GTCAATGGTGTCTGAGCTC---TCGACTTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTT 150680 Query 46579 AACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 150679 GACGAAGATCTGCAT 150665 Score = 122 bits (134), Expect = 1e-22 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| |||| ||| |||||||||||| ||||| ||||| || ||||| |||| ||| Sbjct 146574 ACCAAGTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCG 146633 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || |||||||||||||| || | ||||| ||||| | || | || ||||||||| | Sbjct 146634 AGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGG 146693 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| |||||| | | | ||||| || || || || | |||||||| ||| Sbjct 146694 ATCTTGGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTG 146753 Query 46565 CCCGTCAGCGTTTTAAC 46581 || ||||| || ||||| Sbjct 146754 CCAGTCAGAGTCTTAAC 146770 Score = 118 bits (130), Expect = 1e-21 Identities = 144/195 (74%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| ||||| || ||||| | || || | ||||||||||||||| Sbjct 145907 CTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 145966 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||| || || ||||| | || | || |||||||||| |||||| |||| | | Sbjct 145967 GATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTTACATT 146026 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | |||||| |||| ||||| || | |||||||| ||||| || || || || Sbjct 146027 GTCGATCGTGTCGGAGCTC---TCCACCTCGAGTGTGATGGTCTTGCCGGTGAGAGTCTT 146083 Query 46579 AACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 146084 CACGAAGATCTGCAT 146098 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 ||| || ||||| ||||| || || || ||||| | || || | ||||||||||||||| Sbjct 146135 CTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCCTCCAACTGCTTGCCGGCGAA 146194 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||| ||||| | || | || ||||||||| |||||| |||| | | Sbjct 146195 GATGAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTTTGTCTTCACGTT 146254 Query 46522 CGCCACCGTGTC---GCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | ||||| |||| || || || | ||||| || ||||| || || || || Sbjct 146255 ATCAATGGTGTCTGAGCTC---TCGACTTCGAGAGTGATAGTCTTGCCGGTGAGGGTCTT 146311 Query 46579 AACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 146312 GACGAAGATCTGCAT 146326 >seq1576 Length=101731 Score = 136 bits (150), Expect = 4e-27 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||| |||||||||||||| || || |||| |||||||||||||||||||| Sbjct 30269 TCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCGAGCTGCTTGCCGGCGAAG 30210 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || || ||||| | || | || ||||||||| |||||| |||||| ||| Sbjct 30209 ATGAGACGTTGTTGGTCTGGTGGGATGCCCTCCTTGTCTTGGATCTTGGTCTTGA-CGTT 30151 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||||| || || || || | |||||||| ||||| || || || || || Sbjct 30150 GTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTGCCTGTGAGTGTCTTGAC 30091 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 30090 AAAGATCTGCAT 30079 >seq694 Length=64764 Score = 123 bits (136), Expect = 3e-23 Identities = 145/194 (75%), Gaps = 4/194 (2%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || ||||| || |||| |||||||||||||||||||| Sbjct 29573 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 29632 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GC 46519 || | ||||| ||||| | || | | ||||||||| ||| || |||||| || Sbjct 29633 GATGAGTCGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGGATTTTGGTCTTGACGGC 29692 Query 46520 GTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 |||| | | |||| || ||||| || | ||||| || || |||||||| || || Sbjct 29693 GTCG--ATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTG 29750 Query 46580 ACAAAGATTTGCAT 46593 || ||||| ||||| Sbjct 29751 ACGAAGATCTGCAT 29764 >seq1017 Length=42706 Score = 116 bits (128), Expect = 4e-21 Identities = 136/182 (75%), Gaps = 4/182 (2%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 11216 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAA 11275 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGA--GC 46519 || | ||||| ||||| | || | | ||||||||| |||||| |||||| || Sbjct 11276 GATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGGATCTTGGTCTTGACGGC 11335 Query 46520 GTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTA 46579 |||| | | |||| ||| || || || | ||||| || ||||| || || || || Sbjct 11336 GTCG--ATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTCTTG 11393 Query 46580 AC 46581 || Sbjct 11394 AC 11395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565226134326720