Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq214 192 6e-44 seq1017 132 5e-26 seq725 131 2e-25 seq1576 129 6e-25 seq694 116 4e-21 >seq214 Length=80960 Score = 192 bits (212), Expect = 6e-44 Identities = 410/598 (69%), Gaps = 17/598 (3%) Strand=Plus/Plus Query 132627 CTCaaaaaaa-TTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGG 132685 |||| || || || || || || | || || ||| | ||| || || ||||| || | Sbjct 11246 CTCACAAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTG 11305 Query 132686 CTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAACT 132742 | |||||||||||| | | |||| || | || ||||| | ||| || || || | Sbjct 11306 TGGCGTTGTAGTGCTTCTCGTTCCCGA---GGGCTACCAGCAGTCGGTCAGCGACAAATT 11362 Query 132743 CGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCA-GCGCTTC 132800 ||||||| || ||| || || | | | || | || | | || || | | || || Sbjct 11363 CGATGTACTGGCTCATAAGTCGTGCGTTCATG-CCGATCA-ATGAACAGGGAAGAGCATC 11420 Query 132801 GGTGAG-AAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCG 132859 ||| || ||||| | |||| |||| ||| | |||| | ||| | |||| | | Sbjct 11421 GGTCAGGAAAGCCT-GCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGG 11479 Query 132860 CGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCT 132919 | |||||| | | | || |||| | |||||||||||||||| |||| |||| Sbjct 11480 GGTGCGGCCGCTTCTTGAGGTGGCTGAAGAGCAAGCAAGCAAAGTCGGTGTGCAGACCCT 11539 Query 132920 CGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGA 132979 |||| | | ||||| |||||| ||| || | ||||||||||| || || || |||| Sbjct 11540 CGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTTCTTGA 11599 Query 132980 GCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 |||| || |||| ||||||| ||| || ||||||| ||||| ||||| || || || | Sbjct 11600 GCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAAGGCAA 11659 Query 133040 CCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCT 133099 ||||||||||| | || |||| || | | | |||||||||||| ||||| ||||||| Sbjct 11660 CCAGGCGCTCGGCAAAGGTGGAGTCCTCGTCGTTGATCCAGCGCAGGGCCCACTCGGCCT 11719 Query 133100 TTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCT-TCCGAG 133158 ||| |||||| || || || || ||||||| || | | | | | || | || | Sbjct 11720 TTTGCTTGACGACGGGAATGGTCTCCATGGCGTCGAAGAG--GTACTCGCGCTGTGCGGG 11777 Query 133159 GAA-CGCACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATG 133215 | || | ||| |||||||||||| || || | || ||||| | ||||||| || Sbjct 11778 GTCGCGAATGTATGTGTCGATGAGGAGGGAGTATGTCTCGGAGTGAATGTTCTCCCTG 11835 Score = 187 bits (206), Expect = 2e-42 Identities = 179/226 (79%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 133218 GATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC-GAAACGCT 133276 |||||| |||||||| ||||| || ||||| | |||| || ||| |||| ||| |||| Sbjct 11914 GATTTGGAAGCCGTAGAAGCATCGAGCCTCTGCTGCCTGGACCTCT-GAGCTGAACCGCT 11972 Query 133277 CGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGA 133336 |||| || || |||||||||||||| || |||||||| || || || ||||| ||| Sbjct 11973 CGACGAGGTTCTCGTTGACGATGCCATCTGACGCGGCGAAGAATGCGAGGACGTGGCTGA 12032 Query 133337 TGAAATGGCGCTCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGT 133393 |||| || ||||||||||||||||| | ||||||||| || |||||||||| |||| Sbjct 12033 TGAAGTGTCGCTCGTTGTCGTTCAACTTGTTGTCCCAGTCGTGCATGTCCTTGGAAAGGT 12092 Query 133394 CCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 | | ||||||| | ||||| ||||| ||||| || || |||||||| Sbjct 12093 CGATCTCCTCGGCCGTCCAGAACGATGCCTCTGCCTTCTTGTACAT 12138 >seq1017 Length=42706 Score = 132 bits (146), Expect = 5e-26 Identities = 154/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 38255 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA 38314 ||| || || ||||| ||||| || |||||| |||| |||||| | ||||| | | | Sbjct 11396 CGTCAAGACCCTCACCGGCAAGACGATCACCCTCGAGGTCGAGTCGTCCGACTCCATCGA 11337 Query 38315 AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCA 38373 | | | |||| || |||| ||||| || || |||||| | ||||||||||| |||| Sbjct 11336 CGC-CGTCAAGACCAAGATCCAGGACAAGGAAGGTATTCCCCCGGACCAACAGCGTCTCA 11278 Query 38374 TTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGG 38433 | | ||| ||||| ||||| || |||| ||||||||| ||||||||||||||| |||| Sbjct 11277 TCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAACATCCAGAAGG 11218 Query 38434 AAGCGACGCTGCATTTGGTGCTGCG 38458 | | || || || ||||| || || Sbjct 11217 AGTCCACTCTTCACTTGGTCCTCCG 11193 >seq725 Length=189678 Score = 131 bits (144), Expect = 2e-25 Identities = 162/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| |||| ||||| | | Sbjct 150893 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTCGAATCATCA 150952 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| || || | ||||| ||||| ||||| | |||| Sbjct 150953 GACACCATCGACAACG--TGAAGACGAAGATTCAGGACAAGGAGGGCATTCCTCCGGACC 151010 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| | || | ||||||||| ||||| || |||| |||||||| ||||||| Sbjct 151011 AACAGCGATTGATCTTCGCGGGCAAGCAGCTCGAAGACGGCCGCACCCTTTCGGACTACA 151070 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||| |||||||| | || || |||||||| || ||| Sbjct 151071 ACATTCAAAAGGAGTCCACTCTTCATTTGGTCCTCCGT 151108 Score = 127 bits (140), Expect = 2e-24 Identities = 161/218 (74%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || ||||| |||| |||||| | | Sbjct 146326 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCA 146267 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | |||| | |||| ||| |||| ||||| ||||| ||||| | |||| Sbjct 146266 GACACCATTGATAACG--TGAAGACAAAGATCCAAGACAAGGAGGGCATTCCTCCGGACC 146209 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 ||||||| ||||| | ||| ||||| ||| |||| || | |||||||| || |||| Sbjct 146208 AACAGCGTCTCATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCTGATTACA 146149 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||| || || | || || || ||||| || ||| Sbjct 146148 ACATCCAGAAAGAGTCCACCCTTCACTTGGTCCTCCGT 146111 Score = 123 bits (136), Expect = 2e-23 Identities = 153/206 (74%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 38255 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA 38314 ||| || || || || ||||| ||||||||| |||| || ||| || | |||| | | | Sbjct 146771 CGTTAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACCATCGA 146712 Query 38315 -AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 || | | |||| || |||| ||||| ||||| || || | ||||||||||| ||| Sbjct 146711 CAATG--TCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCAACAGCGTCTC 146654 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| ||||| || || || |||| |||||||| ||| ||||||||||||||| Sbjct 146653 ATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACCCTTTCCGATTACAACATCCAAAAG 146594 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCG 38458 || | || ||||| ||||| || || Sbjct 146593 GAGTCCACACTGCACTTGGTCCTCCG 146568 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| |||| || ||| | || Sbjct 146098 ATGCAGATCTTCGTGAAGACTCTCACCGGCAAGACCATCACACTCGAGGTGGAGAGCTCC 146039 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | |||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 146038 GACA-CGATCGACAATGTAAAGACCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCA 145980 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| || | || | ||| ||||| ||| |||| || | |||||||| ||| ||||| Sbjct 145979 ACAACGATTGATCTTCGCCGGCAAGCAGTTGGAGGATGGCCGCACCCTTTCCGATTACAA 145920 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||| | || || || ||||| || ||| Sbjct 145919 CATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGT 145883 Score = 118 bits (130), Expect = 1e-21 Identities = 144/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| || ||||| |||| |||||| | | Sbjct 150665 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTCGAAGTCGAGAGCTCA 150724 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || |||| ||||| ||||| ||||| | |||| Sbjct 150725 GACACCATTGACAATG--TCAAGACCAAGATCCAAGACAAGGAGGGCATTCCTCCGGACC 150782 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||| | ||| ||||| ||||| || |||| |||||||| || |||| Sbjct 150783 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGACGCACCCTTTCTGATTACA 150842 Query 38422 ACATCCAAAAGGA 38434 ||||||||||||| Sbjct 150843 ACATCCAAAAGGA 150855 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| |||| || || | | Sbjct 146554 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAAGTTGAATCATCA 146495 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| || | | | |||| || |||| ||||| ||||| || || | ||||| Sbjct 146494 GACA-CGATCGACAATGTCAAGACCAAGATCCAAGACAAGGAGGGCATCCCTCCGGACCA 146436 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| || || | ||| || || ||||| || |||| || |||||| ||||||||| Sbjct 146435 ACAGCGCCTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAA 146376 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | || |||| ||||| || || Sbjct 146375 CATCCAGAAGGAGTCCACATTGCACTTGGTTCTCCG 146340 Score = 109 bits (120), Expect = 5e-19 Identities = 165/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| |||| || || | | Sbjct 145870 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACACTCGAGGTGGAATCATCA 145811 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | | || | | |||| || || | ||||| ||||| || ||| | |||| Sbjct 145810 GACACCATTGACAATG--TCAAGACGAAGATTCAGGACAAGGAGGGCATCCCCCCGGACC 145753 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| | || | ||| ||||| ||||| || || | ||||| ||| ||||||| Sbjct 145752 AGCAGCGATTGATCTTCGCCGGCAAGCAGCTCGAAGATGGCCGCACTCTCTCTGACTACA 145693 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||| |||||||| | || || |||||||| || ||| | | || |||| Sbjct 145692 ACATTCAAAAGGAGTCCACTCTTCATTTGGTCCTCCGTCTCCGCGGTGGCC 145642 Score = 109 bits (120), Expect = 5e-19 Identities = 150/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 38255 CGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA 38314 ||| || || || || ||||| ||||||||| |||| || ||| || | |||| | | Sbjct 150448 CGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCCTCGGACACTATCGA 150507 Query 38315 -AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 || | | |||| || |||| ||||| ||||| || || | ||||| ||||| || Sbjct 150508 CAATG--TCAAGACCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACCAGCAGCGTCTT 150565 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 |||| ||| || || ||||| || |||| || |||||| ||||||||||||||| ||| Sbjct 150566 ATTTTCGCCGGAAAGCAGCTCGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAG 150625 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCG 38458 || | || |||| ||||| || || Sbjct 150626 GAGTCCACATTGCACTTGGTTCTCCG 150651 >seq1576 Length=101731 Score = 129 bits (142), Expect = 6e-25 Identities = 168/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||| ||||| ||||||||| |||| || ||| || || Sbjct 30079 ATGCAGATCTTTGTCAAGACACTCACAGGCAAGACCATCACCCTCGAGGTAGAGTCCTCC 30138 Query 38304 GACA-GCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | || |||| | |||| || |||| ||||| ||||| || || | |||| Sbjct 30139 GACACGATTGACAACG--TCAAGACCAAGATCCAAGACAAGGAGGGCATCCCACCAGACC 30196 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 |||| || ||||| | ||| ||||| ||||| || |||| || || || |||||||| Sbjct 30197 AACAACGTCTCATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGAACGCTATCCGACTACA 30256 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||||| ||| | || || || | || || ||| | | ||||| Sbjct 30257 ACATCCAAAAAGAATCCACCCTCCACCTCGTCCTCCGTCTCCGTGGCGG 30305 >seq694 Length=64764 Score = 116 bits (128), Expect = 4e-21 Identities = 157/216 (73%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || || |||||| |||| || ||| | || Sbjct 29764 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACCCTCGAGGTGGAGTCTTCC 29705 Query 38304 GACAGCGTGCAAACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 ||| | | | | | | |||| ||||||| ||||| || || || ||| | ||||| Sbjct 29704 GACTCCATCGACGC-CGTCAAGACCAAAATCCAGGACAAGGAAGGTATCCCCCCGGACCA 29646 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| ||||| ||||| || |||| || || || |||||||| Sbjct 29645 ACAGCGACTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACTCTTTCGGACTACAA 29586 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| |||| || || | ||||| || Sbjct 29585 CATCCAGAAGGAGTCGACTCTCCACCTCGTGCTTCG 29550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500161946250240