Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1326 340 2e-88 seq1193 269 3e-67 seq805 114 2e-20 >seq1326 Length=227261 Score = 340 bits (376), Expect = 2e-88 Identities = 987/1513 (65%), Gaps = 10/1513 (1%) Strand=Plus/Plus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 |||||||| || ||||| | | ||||| || || || || || ||||| | || || Sbjct 79342 TCAATGTCGTCCTTCGACAGCCGTCCCTTGTCGTTGGTGATGGTGATCTTCTGCGACTTG 79401 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | || ||| ||| | || || || | |||| || || || |||||||| | Sbjct 79402 CCGGTGGTCTTGTCTGCGGCGGAAACGTTGAGAATAGAGTTGGCGTCGACATCGAAGGTG 79461 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | ||||| || ||| | ||||||| || || || | | || || | || Sbjct 79462 ACCTCGATTTGGGGAACACCACGGGGTGCGGGGGGGATGCCGGAGAGCTCGAACTTGCCG 79521 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || || |||| ||| | | | ||| ||||| || ||||| | || || | Sbjct 79522 AGCAAGTTGTTGTCCTTTGTCCGTGCACGCTCACCCTCGTAGACCTGGATCAATACACCG 79581 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 || || || || || |||||||| | ||||| | || | || || || Sbjct 79582 GGCTGGTTGTCGGCGTATGTGGAGAAGATCTCGGACTTCTTGGTGGGGACAGTGGTGTTA 79641 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 | | || | || || | | ||| || ||| |||| || | || ||||| | Sbjct 79642 CGCTTGATGAGGGGAGTGAAGACACCGCCGGCAGTCTCGATACCCATGGAGAGAGGAGCA 79701 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCT 7030 || || | ||| | ||||||||| ||| ||||| | | |||||||| Sbjct 79702 ACATCGAGGAGGAGCAGGTCTTGGGTCTTCTCGGAGGTGTCACCGGAGAGAATGGCGGCC 79761 Query 7031 TGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTA 7090 ||||| | || ||||| ||||| ||||| |||||||| || | || || | || | Sbjct 79762 TGGACAGCGGCACCGTAGGCGACGGCCTCGTCGGGGTTGATGGACTTGTTGGGCTCGCGA 79821 Query 7091 CCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACC 7150 ||||| || | || | | | || | || || || || || |||||||| Sbjct 79822 CCGTTGAAGAAGTCGCGGAGGAGCTTCTGGACACGGGGAATACGCGTGGAACCACCGACA 79881 Query 7151 AAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACA 7210 | ||||| || || || | || || ||||| ||||| || || || ||||| Sbjct 79882 AGGACGATCTCGTTGACGGAGGCCTTGTCTATCTTGGAGTCGCGGAGGACCTTCTCGACG 79941 Query 7211 GGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATG 7270 || || || | ||| | ||| |||||| ||||| ||||| ||||| || ||| Sbjct 79942 GGCTCGATGGTGTGGGAGAAGAGGTCACCACACAGCTCCTCGAAACGGGCACGAGTGATG 80001 Query 7271 GATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTC 7330 || || ||||| || | || || | | || || || || ||||| || || || | Sbjct 80002 GAGGTGTAGAAGTCGATACCCTCAAAGAGGGAGTCGATCTCGATGGTGGTCTGGGCGGCG 80061 Query 7331 GAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGG 7390 ||||| | || |||||||| ||||| || || || | |||||||| |||||| | Sbjct 80062 GAAGAAAGAGTGCGCTTTGCTCGCTCGGCGGCGGTGCGGAGACGACGAACGGCACGGGCA 80121 Query 7391 TTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGT 7450 || || || ||||| | || || || ||||| | ||||| | ||| Sbjct 80122 GAGGAGGTGATGTCCTTCTTGTTCTTGCGCTTGAACTCCTGGACAAAGTGGGTTACGAGA 80181 Query 7451 CTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAG 7510 | ||||| || || ||||||||||| || || || ||||| || ||||| || || Sbjct 80182 CGGTTGTCGAAGTCCTCGCCACCCAAGTGGGTGTCACCGGCGGTGGCCTTGACCTCGAAT 80241 Query 7511 ATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATG 7570 || || | || ||| | | | ||| ||||| ||||| || || |||| ||| || ||| Sbjct 80242 ATGCCCTCCTCGATGGTGAGGAGCGAGACATCGAACGTGCCTCCTCCCAAGTCGAAGATG 80301 Query 7571 AGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTT 7630 || |||||| | ||| | || ||||| ||||||||||| || || || || || || Sbjct 80302 AGAACGTTCTTCTCGCCCTCGCCCTTCTTGTCGAGACCGTAAGCAATGGCAGCGGCAGTG 80361 Query 7631 GGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 || || || || || || | ||| ||| || || ||||| || | || || || || || Sbjct 80362 GGCTCGTTGATGATTCGCATGAC-GTTGAGACCGGCAATGGTACCGGCGTCCTTGGTAGC 80420 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 |||||||| || ||||| |||||||| || || || ||||| |||||| |||| Sbjct 80421 CTGTCGTTGAGAGTCGTTGAAGTAGGCGGGAACAGTGACGACGGCGTCCTTGACGGAGCC 80480 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809 |||||| || | || || | || ||| ||| |||||||| | || | ||| || Sbjct 80481 ACCGAGGTAGGCCTCGGCAGTCTCGCGCATCTTGAGCAGAACCATGGCGGAGACCTCCTC 80540 Query 7810 AGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAG 7868 || | || ||| || || || || || | || || | || || || || | | Sbjct 80541 AGGGGTGAA-TGTCTTGGTCTCGCCCTTGTACTCGACCTGGATTATTGGCTT---GGTAC 80596 Query 7869 CACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAA 7928 | | ||| ||||| | | ||| | ||||| ||| || |||| ||| | | Sbjct 80597 CTTGGTCGATGACCTTGAAGGGCCAGTGCTTCATGTCGGACTGTACCTCGGAGTCAGCGA 80656 Query 7929 ACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTT 7988 |||| | ||||| || ||||| || || || |||||||| | |||||||||||| || | Sbjct 80657 ACTTGCGGCCGATGAGTCGCTTGGCGTCGAAGACTGTGTTGTGGGGGTTCATGGCGGTCT 80716 Query 7989 GGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATG 8048 ||||||| || ||||| ||||| || || || || || || |||||||| || | Sbjct 80717 GGTTCTTGGCGGCGTCACCGATGAGGCGCTC---CGAGTCGGTGAAGGCGACGTATGAGG 80773 Query 8049 GGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGC 8108 |||| || || || || || ||||| || || | || || ||||| |||||||| ||| Sbjct 80774 GGGTTGTGCGGTTACCCTGATCGTTGGCGATGACCTCAACCCGGTCATTTTGCCATACGG 80833 Query 8109 CGACGCACGAATA 8121 |||| || || || Sbjct 80834 CGACACAGGAGTA 80846 >seq1193 Length=24932 Score = 269 bits (298), Expect = 3e-67 Identities = 726/1102 (66%), Gaps = 10/1102 (1%) Strand=Plus/Plus Query 7022 ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTC 7081 |||||||| ||||| | || ||||| ||||| ||||| |||||||| || | || || Sbjct 7934 ATGGCGGCCTGGACAGCGGCACCGTAGGCGACGGCCTCGTCGGGGTTGATGGACTTGTTG 7993 Query 7082 AGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGAT 7141 | || |||||| || | || | | | || | || || || || || Sbjct 7994 GGCTCGCGACCGTTGAAGAAGTCGCGGAGGAGCTTCTGGACACGGGGAATACGCGTGGAA 8053 Query 7142 CCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTT 7201 |||||||| | ||||| || || || | || || ||||| ||||| || || Sbjct 8054 CCACCGACAAGGACGATCTCGTTGACGGAGGCCTTGTCTATCTTCGAGTCGCGGAGGACC 8113 Query 7202 TTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCA 7261 || ||||| || || || | ||| | ||| |||||| ||||| ||||| ||| Sbjct 8114 TTCTCGACGGGCTCGATGGTGTGGGAGAAGAGGTCACCACACAGCTCCTCGAAACGGGCA 8173 Query 7262 CGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTT 7321 || || ||||| || || || | | || || | | || || || || ||||| || Sbjct 8174 CGAGTGATGGAGGTGTAAAAGTTGATACCCTCAAAGAGGGAGTCGATCTCGATGGTGGTC 8233 Query 7322 TGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGG 7381 || || | ||||| | || |||||||| ||||| | || || | |||||||| | Sbjct 8234 TGGGCGGCGGAAGAAAGAGTGCGCTTTGCTCGCTCGGCGGTGGTACGGAGACGACGAACG 8293 Query 7382 GCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGT 7441 ||||| | || || | ||||| | || || || ||||| | ||||| Sbjct 8294 GCACGGGCAGAGGAGGTGATGGCCTTCTTGTTCTTGCGCTTGAACTCCTGGACAAAGTGG 8353 Query 7442 CGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTG 7501 | ||| | ||| | || || ||||||||||| || || || ||||| || ||| Sbjct 8354 GTTACGAGACGGTTGTCGGAGTCCTCGCCACCCAAGTGGGTGTCACCGGCGGTGGCCTTG 8413 Query 7502 ACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561 || || || || || | || ||| | | | ||| ||||| ||||| || | |||| | Sbjct 8414 ACCTCGAATATGCCCTCCTCGATGGTGAGGAGCGAGACATCGAACGTGCCTCTTCCCAAG 8473 Query 7562 TCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCC 7621 || || ||||| |||||| | ||| | || ||||| ||||||||||| || || || Sbjct 8474 TCGAAGATGAGAACGTTCTTCTCGCCCTCGCCCTTCTTGTCGAGACCGTAAGCAATGGCA 8533 Query 7622 GCCGCCGTTGGTTCATTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATC 7680 || || || || || || || || || | ||| ||| || || ||||| || | || || Sbjct 8534 GCGGCAGTGGGCTCGTTGATGATTCGCATGAC-GTTGAGACCGGCAATGGTACCGGCGTC 8592 Query 7681 TTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGT 7740 || || || |||||||| || ||||| ||||| || || || || |||| |||||| | Sbjct 8593 CTTGGTGGCCTGTCGTTGAGAGTCGTTGAAGTAAGCGGGAACAGTGACGATGGCGTCCTT 8652 Query 7741 GACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGA 7800 || |||||| || | || || | || ||| ||| || ||||| | || Sbjct 8653 TACGGAGCCACCGAGGTAGGCCTCGGCAGTCTCGCGCATCTTGAGCAGGACCATGGCGGA 8712 Query 7801 AATCTCTTCAGCCGCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTT 7859 | ||| |||| | || ||| || || || || || | || || | || | || | Sbjct 8713 GACCTCCTCAGGGGTGAA-TGTCTTGGTCTCGCCCTTGTACTCGACCTGGATTAGTGGCT 8771 Query 7860 TATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTT 7919 | | | | | ||| ||| | | | ||| | ||||| ||| || |||| Sbjct 8772 T---GGTACCTTGGTCGATGACCCTGAAGGGCCAGTGCTTCATGTCGGACTGTACCTCGG 8828 Query 7920 GGTCCGAAAACTTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCA 7979 ||| | ||||| | | ||| || ||||| || || || |||||||| | ||||||| Sbjct 8829 AGTCGGCGAACTTGCGGCAGATGAGTCGCTTGGCGTCGAAGACTGTGTTGTGCGGGTTCA 8888 Query 7980 TGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGA 8039 |||| || |||||||| | ||||| ||||| || || || | | || ||||| || | Sbjct 8889 TGGCGGTCTGGTTCTTGGTGGCGTCACCGATGAGGCGCTC-TGA--GTCGGTAAAGGCCA 8945 Query 8040 CGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTT 8099 |||| || ||||| || || || | |||||||| || || | || |||||| | |||| Sbjct 8946 CGTATGAGGGGGTTGTGCGGTTACTCTGGTCGTTGGCGATGACCTCAACGCGGCCATTTT 9005 Query 8100 GCCAGACGCCGACGCACGAATA 8121 |||| ||| | || || || || Sbjct 9006 GCCATACGGCAACACAGGAGTA 9027 >seq805 Length=61808 Score = 114 bits (126), Expect = 2e-20 Identities = 279/414 (67%), Gaps = 18/414 (4%) Strand=Plus/Plus Query 7247 TCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCA 7306 ||||| ||||| |||||||| ||||| | | ||| || | |||| | | | || || Sbjct 21251 TCCTCGAAACGGGCACGGGTGATGGAGGCCTGGAAGTCGATACCGTTGGAGAGGGAGTCG 21310 Query 7307 ATTTCAATGGTTGTTTG--TGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCG 7364 | || | || || || || | | || | ||||||||||||||||| ||||| | Sbjct 21311 ACCTCGACAGTGGTCTGGGTGACACTG--GACAGTGTTCGCTTTGCGCGCTCGCACGCAG 21368 Query 7365 TTCGTAAACGACGAAGGGCACGCGGGTT---ACCGGAAATATCTTTCTTATGTTTACGTT 7421 || | |||||| | |||||| |||| |||| || || ||| | || || | Sbjct 21369 ACCGCAGACGACGGATGGCACGGGGGTCGTCACCG---ATCTCGACCTTGTTCTTGCGCT 21425 Query 7422 TAAACTCTTCAGAGAAGTG-TCGA-AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTG 7479 ||||| | |||||| |||| | | | | | ||||| || |||||||| | || Sbjct 21426 CGAACTCCTTCTTGAAGTGGTCGAGAAGGGCGTTG--TCGAAGTCCTCACCACCGAGATG 21483 Query 7480 TGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAAC 7539 || || || ||||| || ||||| | || | ||| || ||||| | | || || Sbjct 21484 GGTGTCACCAGCGGTTGCCTTGACGGCGAAAACACCACCAGTGATGTTGAGAAGGGAGAC 21543 Query 7540 ATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG--TTC 7597 ||| ||||| || || || ||||| |||||||| |||||| | ||| ||| || || Sbjct 21544 ATCGAACGTGCCTCCTCCGAGGTCGAAAATGAGAACGTTCTTCTCG--GTCGATGACTTG 21601 Query 7598 TTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 ||||||||||| || || || || || || || || || || ||||| ||| Sbjct 21602 GAGTCGAGACCGTAAGCAATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGA 21655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635119017618240