Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq908 201 1e-46 seq214 127 3e-24 >seq908 Length=183814 Score = 201 bits (222), Expect = 1e-46 Identities = 478/716 (67%), Gaps = 15/716 (2%) Strand=Plus/Plus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| ||| || | || ||||||||||||||||| ||||| | || |||||||| Sbjct 169964 TTCACCCATGCCTCCCCCACCCTCTTCAACGCTGGCACACCCAACCCTCAAATGTCATCA 170023 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 || ||||| | | | ||||| || |||||| |||| || |||| ||| |||| Sbjct 170024 TGCTTCCTGGTCACCATGAAGGACGACTCAATCGATGGTATCTACGACACCCTCAAGACC 170083 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 || ||| ||| ||| ||||||||| ||||| | ||||||| || | | Sbjct 170084 TGCGCCATGATCAGCAAGACGGCTGGTGGCATCGGCCTCAACATCCACTGCATCCGTGGT 170143 Query 111885 AACAAGTCTCGT--ATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTC 111942 | | | ||||| ||| || || || ||| || | ||||| | || ||||||| Sbjct 170144 ACC--GGCTCGTACATTGCCGGAACTAACGGTGTCTCTAACGGTATCGTGCCTATGCTTC 170201 Query 111943 GCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGG------GCGTCGCAAGGGAT 111996 |||| || ||| ||| || ||||| || |||| | ||| ||||| || || Sbjct 170202 GCGTCTTCAACAACACCGCTCGCTACGTCGACCAGGGTGGCAACAAGCGTC-CA--GGTG 170258 Query 111997 CTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTC 112056 | |||| |||| ||||||| |||||| | || || | |||||||| || | | Sbjct 170259 CCTTCGCCATCTACATTGAGCCCTGGCACTCTGACGTCTTCGAGTTCCTCGACCTCAGGA 170318 Query 112057 TCAACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAG 112116 ||||| || | ||||||| || ||| || ||||||| ||| || ||||| |||| Sbjct 170319 AGAACCACGGCAAGGAGGAGGTCCGAGCCCGTGAGCTCTTCTACGCCCTTTGGATCCCAG 170378 Query 112117 ATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGG 112176 | | ||||||||| |||| || ||| || | ||||| || | || || | | || Sbjct 170379 ACTTGTTCATGAAGCGAGTCGAACAGAACGGAGAGTGGTCGCTGATGTGCCCCGCCGAGT 170438 Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236 ||||||||| | |||| | || || ||||| || || |||||| ||||||||| Sbjct 170439 GCCCCGGTCTCGCTGATGTCTACGGCGACGAGTTCGAGGCTCTCTACGAGAAGTACGAGC 170498 Query 112237 AAGAAAGTCGGGCGACTGCG-ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAG 112295 || |||| || | || || || ||| | | ||| | || ||||| || Sbjct 170499 GTGAGGGTCGTGC-TCGCCGAACCGTCAAGGCTCAAAAGCTTTGGTACGCCGTTCTCGAG 170557 Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355 |||| || |||||||| | || | ||||||||||| ||||| ||||| ||| Sbjct 170558 GCTCAGACGGAGACTGGCAACCCTTTCATGCTTTACAAGGACGCTGCTAACCGCAAGTCG 170617 Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGA 112411 || |||||||| | || |||||| | || ||||| || || || ||| |||| Sbjct 170618 AACCAAAAGAACCTCGGCACCATCAAGTGCTCTAACCTGTGCACGGAGATCATGGA 170673 >seq214 Length=80960 Score = 127 bits (140), Expect = 3e-24 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 102172 CCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCT 102231 ||||||| ||||| || | || ||||| || ||||||||||||||||| || || | Sbjct 11677 CCTTTGCCGAGCGCCTGGTTGCCTTTGCTGCCGTAGAGGGTATCTTCTTCTCCGGCTCTT 11618 Query 102232 TCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACG 102291 || | | || | |||||||||||||| ||||||||||| |||||| ||||||||||| Sbjct 11617 TCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGTCTCACCTTCTCCAACG 11558 Query 102292 AGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||| ||| || |||||||| || ||| || ||||| Sbjct 11557 AGCTCATCAGCCGAGACGAGGGTCTGCACACCGACTTTGC 11518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620728929889920