Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq908 167 3e-36 >seq908 Length=183814 Score = 167 bits (184), Expect = 3e-36 Identities = 561/865 (65%), Gaps = 19/865 (2%) Strand=Plus/Minus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 || ||||| ||| ||||| ||||| |||| ||| || || |||| |||| Sbjct 170727 GGCAGAGCCATACTGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATG 170668 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || ||||| |||| ||| || | ||| ||| || | |||||| || ||||| ||| | Sbjct 170667 ATCTCCGTGCACAGGTTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGG 170608 Query 110401 TT-GCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAAT 110459 || ||| || ||||| || |||||| | ||| | ||||| |||||||| | || ||||| Sbjct 170607 TTAGCA-GCGTCCTTGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAAC 170549 Query 110460 GGCCTTCCATACATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 ||| | ||| | | || ||| ||| | ||| |||| || ||||||||| Sbjct 170548 GGCGTACCAAAGCTTTTGAGCCTTGACGGTTCGGCGAGCACGACCCTCACGCTCGTACTT 170489 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTTGTCGGG 110579 ||| | |||| || || | ||||| ||||||| ||||| || | |||| Sbjct 170488 CTCGTAGAGAGCCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGG 170429 Query 110580 ACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCA 110639 || | || ||||| | ||| || || || | ||||||||||| ||| || ||||| Sbjct 170428 GCACATCAGCGACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATCCA 170369 Query 110640 CATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTC 110699 | || |||| || |||||| || |||| || | || ||||| | || || Sbjct 170368 AAGGGCGTAGAAGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTC 170309 Query 110700 CAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACG 110759 | || || | || || |||||||| || || | |||| |||| || || ||| Sbjct 170308 GAGGAACTCGAAGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACG 170249 Query 110760 ---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAAT 110816 || |||||| || ||||| || ||| |||||||| | |||||||| | Sbjct 170248 CTTGTTGCCACCCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCAC 170189 Query 110817 AATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTG 110876 || || | || ||| || || || ||| || | |||| ||| ||| Sbjct 170188 GATACCGTTAGAGACACCGTTAGTTCCGGCAATGTACGAGCCGGTACCACGGATGCAGTG 170129 Query 110877 GATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACA-CTCTGTGAGTGTAC 110935 ||| | | || || ||||| ||| ||| || || || || ||| |||| || Sbjct 170128 GATGTTGAGGCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCT-TGAGGGTGT 170070 Query 110936 CATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAG 110995 | || |||||||| || || || |||| ||| | || ||||| || ||||| |||| Sbjct 170069 CGTAGATACCATCGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGACATTTGAG 170010 Query 110996 GACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCT-TGGGAC 111054 | || || || || |||||||| || || | ||||| |||| || | | ||| Sbjct 170009 GGTTGGGTGTGCCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGAC 169951 Query 111055 ATCTTGTTGTATGTGTCGAGTGC-----GGAGGGTACATCTTTACCGTGAATACCAATGG 111109 || |||||| ||||||| || || || || | ||||| || || | | Sbjct 169950 ATGAGGTTGTAAGTGTCGATGGCCTCGTCGATGGAAC-----TCCCGTGGATGCCGACAG 169896 Query 111110 CAACTCGCATGAACATATATTGAGG 111134 |||||||||||| ||| | ||| || Sbjct 169895 CAACTCGCATGAGCATGTGTTGGGG 169871 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588963219220800