Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq908 178 2e-39 seq214 113 5e-20 >seq908 Length=183814 Score = 178 bits (196), Expect = 2e-39 Identities = 558/850 (66%), Gaps = 31/850 (4%) Strand=Plus/Minus Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 ||||| ||||| ||||||| | | ||||||| | || || || |||| ||| || Sbjct 170706 TTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACAGGTTAGAG 170647 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTT-GCACGCATCCTTGTAGAG 106596 | ||| || || || | ||||||||||| ||| ||| ||| || |||||||| || Sbjct 170646 CACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCA-GCGTCCTTGTAAAG 170588 Query 106597 CATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGG 106655 |||| | || | || ||||||||||| | || ||||| || | ||| | | | | | Sbjct 170587 CATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCTTTTGAGC 170528 Query 106656 CTGGTACAAT--GGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAA 106713 || | || | |||| || || ||||| ||||||||| |||||| || || || Sbjct 170527 CTTG-ACGGTTCGGCG--AGCACGACCCTCACGCTCGTACTTCTCGTAGAGAGCCTCGAA 170471 Query 106714 CTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTG 106773 ||| || || | || | |||||| || || | | || || | || ||||| | Sbjct 170470 CTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCGACCACTC 170411 Query 106774 ACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATC 106833 || || || || ||||||||||| | |||||| ||||| |||| | ||||| || Sbjct 170410 TCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATCCAAAGGGCGTAGAAGAGCTC 170351 Query 106834 TCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATC 106893 | || |||| || | || ||||| | | || |||||||| | || || Sbjct 170350 ACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGAAGACGTC 170291 Query 106894 CGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTG 106947 | |||||| ||||||| |||| |||| | || | ||||| ||| | || Sbjct 170290 AGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACC---TGGACGCTTGTTGCCACCCTG 170234 Query 106948 ATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTG 107007 | || ||||| || ||| ||| || ||||||||||| || | ||||| | || Sbjct 170233 GTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAGAGAC 170174 Query 107008 ACCATTTGTCCCCCGAA--TACGAGATTTATTGGCTCTCAC--AT-CA-TGGATGTGCAT 107061 ||| || || || || |||||| | | ||| || || ||||||| | Sbjct 170173 ACCGTTAGTTCCGGCAATGTACGAG------CCGGTACCACGGATGCAGTGGATGTTGAG 170120 Query 107062 CCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACC 107121 || || || |||||| ||| ||| || || | | || || | |||||||| Sbjct 170119 GCCGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACC 170060 Query 107122 GTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGT 107181 | ||||||||| ||||| ||| || |||||||| ||||| || || | ||||| Sbjct 170059 ATCGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGACATTTGAGGGTTGGGTGT 170000 Query 107182 ACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGT 107240 ||||| ||||||||||| || | || || |||| ||| | | ||||| || || Sbjct 169999 GCCAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAA-GTACTTCTCCGACATGAGGTTGT 169941 Query 107241 ATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACA 107300 | || || | | | || ||| |||||||||||||| || || ||||| | || Sbjct 169940 AAGTGTCGATGGCCTCGTCGATGGAACTCCCGTGGATGCCGACAGCAACTCGCATGAGCA 169881 Query 107301 TGTATTGGGG 107310 ||| |||||| Sbjct 169880 TGTGTTGGGG 169871 >seq214 Length=80960 Score = 113 bits (124), Expect = 5e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| |||||||| |||||| || || || || |||||| || || Sbjct 11518 GCAAAGTCGGTGTGCAGACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCG 11577 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||||||| |||||||| | ||| | || | | ||| || ||||||||||||||| Sbjct 11578 GGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATA 11637 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 ||||| || ||||| |||| ||||||||||| |||| Sbjct 11638 CCCTCTACGGCAGCAAAGGCAACCAGGCGCTCGGCAAAGG 11677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589967997416640