Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq725 170 4e-37 seq1576 156 9e-33 seq694 143 6e-29 seq1017 123 6e-23 >seq725 Length=189678 Score = 170 bits (188), Expect = 4e-37 Identities = 163/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||||||||||||||| ||||| || |||||||| | ||| || | || || ||| Sbjct 150873 ACAAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAAAGGGTGCGTCCGTCCTCG 150814 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || ||||| ||||||||||| || |||||||| Sbjct 150813 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 150754 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||| || ||||||||||| || || || ||||| || || | ||||| Sbjct 150753 ATCTTGGTCTTGACATTGTCAATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTG 150694 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 150693 CCGGTGAGGGTCTTGACGAAGATCTGCAT 150665 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| ||||||||||| || || |||||||| | ||| || | ||||| || | ||| Sbjct 146123 GTGAAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCCTCCAACTG 146182 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || |||||||| ||||||||||| || |||||||| || || Sbjct 146183 CTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGGATCTT 146242 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 | ||| ||||| ||||||||||| || || || ||||| || || | ||||| || || Sbjct 146243 TGTCTTCACGTTATCAATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTGCCGGT 146302 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 146303 GAGGGTCTTGACGAAGATCTGCAT 146326 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||||||||| |||||||| ||||| || | ||||| | ||||||||||||||| Sbjct 145668 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCGAGCTGC 145727 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | ||| || ||||| || || ||||| || ||||| ||||| || Sbjct 145728 TTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTC 145787 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 |||||| || ||||||||||| || |||||| || || || | ||||| || || Sbjct 145788 GTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTGCCGGTG 145847 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 145848 AGGGTCTTGACGAAGATCTGCAT 145870 Score = 154 bits (170), Expect = 3e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 |||||||||||||| |||||||| ||||| || | ||| || | || |||||||||||| Sbjct 151095 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCGAGCTGC 151036 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || |||||||| | ||| |||||||| ||||||||||| || ||||| ||||| || Sbjct 151035 TTGCCCGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTC 150976 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||| ||||| || |||||||| || ||| || || || || | ||||| || || Sbjct 150975 GTCTTCACGTTGTCGATGGTGTCTGATGATTCGACCTCGAGTGTGATGGTCTTGCCGGTG 150916 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 150915 AGGGTCTTGACGAAGATCTGCAT 150893 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || || || |||||||||| ||| || | ||||| || | ||| Sbjct 145895 GTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCCAACTG 145954 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| | |||||||||||| ||||||||||| || ||||| || || || Sbjct 145955 CTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATCTT 146014 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| || || || || ||||| || || ||||| || || || | ||||| || || Sbjct 146015 GGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCGAGTGTGATGGTCTTGCCGGT 146074 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | ||| || ||||| | ||||| Sbjct 146075 GAGAGTCTTCACGAAGATCTGCAT 146098 Score = 145 bits (160), Expect = 2e-29 Identities = 148/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| || |||||||| ||||| || |||||||||| ||| || | || || ||||| || Sbjct 146579 GTGCAGTGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCGTCCTCGAGTTG 146638 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || |||||||| ||||| ||||| || |||||||| || || Sbjct 146639 CTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTGGATCTT 146698 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||| || || ||||||||||| || || || ||||| | ||||| || || Sbjct 146699 GGTCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 146758 Query 195117 CAAAGTTTTTACG 195129 || ||| || ||| Sbjct 146759 CAGAGTCTTAACG 146771 Score = 136 bits (150), Expect = 9e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | |||||||| || || || ||||| |||| || |||| || || || Sbjct 146345 AACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTC 146404 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||||||||| || |||||||| ||||| ||||| || |||||||| Sbjct 146405 GAGCTGCTTTCCGGCGAAGATAAGGCGCTGTTGGTCCGGAGGGATGCCCTCCTTGTCTTG 146464 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || |||||| || || || ||||| || ||| ||||| || || | ||||| Sbjct 146465 GATCTTGGTCTTGACATTGTCGATCGTGTCTGATGATTCAACTTCGAGTGTGATGGTCTT 146524 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 146525 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 146554 Score = 125 bits (138), Expect = 2e-23 Identities = 147/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | ||| | |||||||| || || || ||||| |||| || |||| || || || Sbjct 150646 AACCAAGTGCAATGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTC 150587 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || ||||| ||||| || || ||||| ||||| ||||| || ||||| || Sbjct 150586 GAGCTGCTTTCCGGCGAAAATAAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTG 150527 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || |||||| || || || |||||||| || || || ||||| | ||||| Sbjct 150526 GATCTTGGTCTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTGATGGTCTT 150467 Query 195111 TCCTGTCAAAGTTTTTACG 195129 || |||| ||| || ||| Sbjct 150466 GCCAGTCAGAGTCTTGACG 150448 >seq1576 Length=101731 Score = 156 bits (172), Expect = 9e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||||| |||||||| || ||||| |||| || |||| || |||||| Sbjct 30287 ACGAGGTGGAGGGTGGATTCTTTTTGGATGTTGTAGTCGGATAGCGTTCGGCCGTCTTCG 30228 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || |||||||||||||| || ||||| || |||||||| Sbjct 30227 AGCTGCTTGCCGGCGAAGATGAGACGTTGTTGGTCTGGTGGGATGCCCTCCTTGTCTTGG 30168 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| ||||| ||||| || || || || ||||| | ||||| Sbjct 30167 ATCTTGGTCTTGACGTTGTCAATCGTGTCGGAGGACTCTACCTCGAGGGTGATGGTCTTG 30108 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | || || || || | ||||| Sbjct 30107 CCTGTGAGTGTCTTGACAAAGATCTGCAT 30079 >seq694 Length=64764 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| ||||| ||||| || || || ||||| || | |||||| | || || ||| Sbjct 29556 ACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCG 29615 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| ||||| |||||||| || || || ||||| ||||| || Sbjct 29616 AGCTGCTTGCCGGCGAAGATGAGTCGCTGTTGGTCCGGGGGGATACCTTCCTTGTCCTGG 29675 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 ||||| ||||||| || |||| ||| ||| ||||| || ||||| | ||||| Sbjct 29676 ATTTTGGTCTTGACGGCGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTA 29735 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || ||||| | ||||| Sbjct 29736 CCCGTCAGGGTCTTGACGAAGATCTGCAT 29764 >seq1017 Length=42706 Score = 123 bits (136), Expect = 6e-23 Identities = 143/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || || || ||||| |||| || || | || || |||||||| Sbjct 11204 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTG 11263 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || |||||||| || ||||| ||||| ||||| || || || Sbjct 11264 CTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGGGGAATACCTTCCTTGTCCTGGATCTT 11323 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||| || |||| ||| || || || || ||||| | |||||| || || Sbjct 11324 GGTCTTGACGGCGTCGATGGAGTCGGACGACTCGACCTCGAGGGTGATCGTCTTGCCGGT 11383 Query 195117 CAAAGTTTTTACG 195129 | || || ||| Sbjct 11384 GAGGGTCTTGACG 11396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109456922355512