Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_018283.1 Length=58065 Score E Sequences producing significant alignments: (Bits) Value seq1297 86.0 2e-12 seq1693 82.4 3e-11 >seq1297 Length=17568 Score = 86.0 bits (94), Expect = 2e-12 Identities = 169/246 (69%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 13773 GACCACGGCGTTCCTGCTAATGGCTCGTTACGAGG-GCCAGCCGATCATTCCCGTCGATG 13831 || ||| || ||| | || ||||| | |||| || |||| | || || || ||| Sbjct 17054 GAACACCGCCTTCATCCTCATGGCGCAGTACGGCCCGCGCGCCG-TGATCCCGGTGGATC 16996 Query 13832 TCGTTTGCCGGGACTTCTTCAGCCACTTGACCGTCGAGAAGTTCGTGCGGAAGGTCAGCG 13891 | || |||||||||| ||||||||| |||| ||||| | | | || ||||| | Sbjct 16995 TGGTCTGCCGGGACTATTTCAGCCACCTGACGCCCGAGATGCTGATCCGCAAGGTGTCGG 16936 Query 13892 CTGGCGAGATCGCGATCCCGCTCGTTCGCATGGAGAGCAGCCAGAAGGCCGCGAAGGG-- 13949 | ||||||||||| | || ||||| ||||| ||| |||||||| | || ||||| Sbjct 16935 CCGGCGAGATCGCCCTGCCCCTCGTCCGCATCGAGGCAAGCCAGAAATCGGCCAAGGGTG 16876 Query 13950 -CGTGCACCTGATCGACCTGGCCGCCTATCTCGACGAGCGGCGCAGCGCCGCCGTGAAGG 14008 || || |||| || ||||| ||||| || ||| ||| |||||| |||| Sbjct 16875 TCGGGCTCCTG---GATCTGGCGGCCTACCTAGACAGGCGAATGGAAGCCGCCCGCAAGG 16819 Query 14009 AGTGCC 14014 |||||| Sbjct 16818 AGTGCC 16813 >seq1693 Length=4865 Score = 82.4 bits (90), Expect = 3e-11 Identities = 175/257 (68%), Gaps = 6/257 (2%) Strand=Plus/Minus Query 13768 ATGACGACCACGGCGTTCCTGCTAATGGCTCGTTACGAGGGCCAGCCGATCATTCCCGTC 13827 ||| || |||| | | || || ||||| |||||| |||| |||| | || || | Sbjct 4416 ATGTCGGACACGACATGGCTCCTGATGGCCCGTTACCGCGGCCTGCCGCTGATCCCGATT 4357 Query 13828 GAT--GTCGTTTGCCGGGACTTCTTCAGCCACTTGACCGTCGAGAAGTTCGTGCGGAAGG 13885 || | || ||||| ||| |||| | ||| |||| ||| | | | || |||| Sbjct 4356 GAGACGGTGTGTGCCG--ACTACTTCCGGCACCTGACACCAGAGGCGCTGATCCGAAAGG 4299 Query 13886 TCAGCGCTGGCGAGATCGCGATCCCGCTCGTTCGCATGGAGAGCAGCCAGAAGGCCGCGA 13945 | || ||||||||||| | || ||||||||||| ||| ||||||||| | || | Sbjct 4298 TGTCGGCCGGCGAGATCGCCCTGCCCCTCGTTCGCATCGAGGCCAGCCAGAAATCAGCCA 4239 Query 13946 AGGGCGTGCACCTGATCGACCTGGCCGCCTATCTCGACGAGCGGCGCAG-CGCCGCCGTG 14004 || |||||||| | | |||||| || | ||||||| || |||||| || || Sbjct 4238 AGAGCGTGCACATCAACGACCTCGCGCAATGGCTCGACG-GCCGCGCAGAGGCAGCTCGA 4180 Query 14005 AAGGAGTGCCAGCAGCT 14021 || ||||||| ||||| Sbjct 4179 AAAGAGTGCCGCCAGCT 4163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 185682572074864