Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq1297 93.3 2e-14 >seq1297 Length=17568 Score = 93.3 bits (102), Expect = 2e-14 Identities = 132/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 3378 ACGCCCTTCGCGCACTTCTG-CGAGCGCTCCATCCGCACGATCGGCAAAGTGATGTCGCC 3436 || ||||| || | ||||| | || ||| || || |||| |||| | ||| ||||| Sbjct 16875 ACACCCTTGGCCGATTTCTGGCTTGC-CTCGATGCGGACGAGGGGCAGGGCGATCTCGCC 16933 Query 3437 GTCGAGTACCTTCCGCTGGAGCTTTTCGGGAGACAGGTGCGCGAAGTAGTCGCGGCACAC 3496 | | ||||| || ||| | ||||| | |||||| ||| ||||| ||||| || Sbjct 16934 GGCCGACACCTTGCGGATCAGCATCTCGGGCGTCAGGTGGCTGAAATAGTCCCGGCAGAC 16993 Query 3497 CAGATCGAGGGGGATGACGGCGCGACCGTCGTATTGCGCCATCAGAAGGAAAGCGGTGTT 3556 |||||| | ||||| |||||||| | |||| |||||||| || | ||| |||||||| Sbjct 16994 CAGATCCACCGGGATCACGGCGCGCGGGCCGTACTGCGCCATGAGGATGAAGGCGGTGTT 17053 Query 3557 CAT 3559 ||| Sbjct 17054 CAT 17056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197784722583888