Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq725 107 1e-18 seq694 89.7 4e-13 >seq725 Length=189678 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || ||| ||| |||||||| ||||| ||||| ||| | || | || || Sbjct 145662 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGAGAGAGTGCGGCCATCTTCG 145721 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| ||||| || |||| |||||| || |||| ||| | |||||||||||| | Sbjct 145722 AGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 145781 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| || ||| | | | ||||| | |||||||| | || || || || Sbjct 145782 ATCTTCGTCTTGACATTGTCAATGGTGTCTGATGATTCCACCTCGAGTGTGATGGTCTTG 145841 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || || |||||||| Sbjct 145842 CCGGTGAGGGTCTTGACGAAGATCTGCAT 145870 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| ||| || || || |||||||| || || | || | || ||| Sbjct 145890 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCGGAAAGGGTGCGGCCATCCTCC 145949 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 |||||||| ||||| || |||| ||| ||||| |||| |||| |||||||||||| Sbjct 145950 AACTGCTTGCCGGCGAAGATCAATCGTTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGG 146009 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 ||||| |||||| | | | || || ||||||||| | || || || || Sbjct 146010 ATCTTGGTCTTTACATTGTCGATCGTGTCGGAGCTCTCCACCTCGAGTGTGATGGTCTTG 146069 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | ||| || || || |||||||| Sbjct 146070 CCGGTGAGAGTCTTCACGAAGATCTGCAT 146098 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 ||||| || || ||| |||||| || || ||||||||||| || | || | || ||| Sbjct 146118 ACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAATCAGAAAGGGTGCGGCCATCCTCC 146177 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 |||||||| ||||| || || || |||||||| |||| |||| |||||||||||| Sbjct 146178 AACTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCTTGG 146237 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 |||||| || || | | | | ||||| ||| || || | || || || || Sbjct 146238 ATCTTTGTCTTCACGTTATCAATGGTGTCTGAGCTCTCGACTTCGAGAGTGATAGTCTTG 146297 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | || || || || |||||||| Sbjct 146298 CCGGTGAGGGTCTTGACGAAGATCTGCAT 146326 Score = 95.1 bits (104), Expect = 9e-15 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || ||| ||| |||||||| ||||| || || || | || |||| || Sbjct 151101 ACCAAATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCG 151042 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 | |||||| || || || |||| ||||||||| |||| |||| |||||||||||| | Sbjct 151041 AGCTGCTTGCCCGCGAAGATCAATCGCTGTTGGTCCGGAGGAATGCCCTCCTTGTCCTGA 150982 Query 48678 ATCTT 48682 ||||| Sbjct 150981 ATCTT 150977 Score = 82.4 bits (90), Expect = 6e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||| ||| ||||| || ||||||||||| || | || |||| || | |||| Sbjct 150867 TGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGAAAGGGTGCGTCCGTCCTCGAGCTGC 150808 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673 || ||||| || || || ||||| || |||| |||| |||||||||||| Sbjct 150807 TTGCCGGCGAAGATGAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTC 150758 >seq694 Length=64764 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || || ||||| || || ||| | || |||| || | |||||| ||||| || Sbjct 29573 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 29632 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGT-TTTACAG 48693 || ||||||||||| |||| ||| | || |||||||| || ||| || || || | Sbjct 29633 GATGAGTCGCTGTTGGTCCGGGGGGATACCTTCCTTGTC-CTGGATTTTGGTCTTGACGG 29691 Query 48694 AACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTA 48753 | | || || || | ||||||||| | || || || || ||||||| || || | Sbjct 29692 CGTCGATGGAGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTACCCGTCAGGGTCTTGA 29751 Query 48754 CAAAAATCTGCAT 48766 | || |||||||| Sbjct 29752 CGAAGATCTGCAT 29764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380929540312728