Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tilletia_20indica_20[genbank_20GCA_5F002220835.1_202017-07-18] 1,736 sequences; 33,771,691 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq908 322 9e-83 seq214 174 3e-38 >seq908 Length=183814 Score = 322 bits (356), Expect = 9e-83 Identities = 1100/1702 (65%), Gaps = 57/1702 (3%) Strand=Plus/Minus Query 212732 GTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTC 212791 ||| || |||||||| ||||| | |||| |||| ||||||||| |||||| | | | | Sbjct 171478 GTCGGCAGCCATGTCGATGATGACCTTCTGCGAGATCTCCCACACTGTCTTGTACAGTGC 171419 Query 212792 TTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTG---TATGGTCAG 212848 |||| | || || | |||||| | |||||| | || || | ||| |||| | | Sbjct 171418 CTTGATGCGGTCGGGAATGCCGGGCACGTTCTGGATCGAGCCGCCGTGGGCTATGATGCG 171359 Query 212849 CTGCAGGCGCATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTG-ACCAGGTGAG 212907 | | ||| | |||||||| || || || || || || | | | ||| || Sbjct 171358 GTTCTT---CATCTGTTCGTTCCACAGACCT-TGCTCGACAAGCTCACGCAGCAGCCAAG 171303 Query 212908 GGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGG 212967 ||||||| | ||||| || || | |||||| | | ||||| ||| ||||| | Sbjct 171302 GGTTGACGACTTGGAACTCGCCGGCGAGCACACGTCGGGTGTAAAGGTTGCTCGTGTAAG 171243 Query 212968 GCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCA 213027 |||| | || ||||||| || || ||||| || || |||||||| || || | Sbjct 171242 GCTCAAAGCACTCGTTGAAGCCGAGGATCTGACTTGTCGAAGCAGTGGGCATAGGGGCGA 171183 Query 213028 CCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCC 213087 ||||||| ||| | | ||||| || | ||| |||| | || |||||||||| Sbjct 171182 GCAGGAGAGAGTTTCGGAGACCGTGTGCGGCAATGTTGCGCTTGATTTCGGCCCAGTCCC 171123 Query 213088 ATCTGCCAGACAGGTCCTC-GTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTG 213146 | || |||| | | | || ||| | || | |||| ||| ||| Sbjct 171122 A-------GA---GTCCACTGGGAGTGACTCCCCAGAGATCGTATTGCAGCTCGCCCTTG 171073 Query 213147 CTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGAC 213206 || |||||||||| ||| | ||||| || |||||||||| |||||||| || Sbjct 171072 CTGGTTGGGCTGCCCTCGTATGTCTCGTAGGTCCCGAGCTCCTTGGCGAGCTCGCACGAT 171013 Query 213207 GCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCT 213266 || || || |||| |||||| || || || |||| ||||||||||||||||||| Sbjct 171012 CGCTCGAGAGCGGCGTGGTAGATCGTCTCGAAGATCTGGATGTTGAGCTTCTTGGCCTC- 170954 Query 213267 GGGGACGTGAAGGGCATCATC-ATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGAT 213325 |||| || | ||| | | | ||| ||| | || || || || | ||| ||||| Sbjct 170953 GGGGCTGTCGAAGGCGTAACCCATGATCATGAAAGCGTCGGCGAGACCGTTGACTCCGAT 170894 Query 213326 GCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAAGTTGCA 213385 |||||||| | ||| | || ||| ||||| ||| | ||||| ||||| Sbjct 170893 ACCGATGGGGCGGTGGCGCATGTTGGACTTCTTCGCCTCGGGAACAGGGTAGTAGTTGAC 170834 Query 213386 GTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG-- 213443 |||||||||||||||||||||| | || ||||| || | | || | || | Sbjct 170833 ATCGATGATCTTGTTGAGGTTGCCACAAACGACCTTGGTAACCTCGTGGAGCTTCTTGAA 170774 Query 213444 --------TGATTGAACACGTAGCCCCCGTCC---TGCACAAACTCAGGCAGGGCGATGC 213492 | ||| ||| | | ||| || || | |||||| || || | Sbjct 170773 GTCGTATGTCCTTGTGTTCGT-GTGCGAGTCGATGTGGACGTAAGAAGGCAGAGCCATAC 170715 Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACA 213552 |||| |||||||| || || ||||| | | | |||||||||||||||| ||||||| Sbjct 170714 TGGCAAGGTTGCAGACAGCGACCTCATCCGGAGCGCTGTACTCCATGATCTCCGTGCACA 170655 Query 213553 GGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCT 213612 |||| ||| ||||||||| ||||||| ||||| ||||| ||| |||| |||| Sbjct 170654 GGTTAGAGCACTTGATGGTGCCGAGGTTCTTTTGGTTCGACTTGCGGTTAGCAGCGTCCT 170595 Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGT 213672 |||| |||||| | ||| || ||||| ||| | | | || | | ||| || | Sbjct 170594 TGTAAAGCATGAAAGGGTTGCCAGTCTCCGTCTGAGCCTCGAGAACGGCGTACCAAAGCT 170535 Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCT 213732 |||||||| || | || || | | |||||||| |||||||| Sbjct 170534 TTTGAGCCTTGACGGTTCGGCGAGCACGACC---CTCACGCTCGTACTTCTCGTAGAGAG 170478 Query 213733 CGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGC 213792 | | ||| |||| ||| |||| | || || || || ||||| ||||| || Sbjct 170477 CCTCGAACTCGTCGCCGTAGACATCAGCGAGACCGGGGCACTCGGCGGGGCACATCAGCG 170418 Query 213793 TCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGA 213852 ||| || |||| | | ||||| || |||||||| ||| |||| ||| || ||| || Sbjct 170417 ACCACTCTCCGTTCTGTTCGACTCGCTTCATGAACAAGTCTGGGATCCAAAGGGCGTAGA 170358 Query 213853 ACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAA 213912 | || || | || | ||| ||| || ||| || | || || || || || | Sbjct 170357 AGAGCTCACGGGCTCGGACCTCCTCCTTGCCGTGGTTCTTCCTGAGGTCGAGGAACTCGA 170298 Query 213913 AGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGC 213969 ||| ||| | |||||| ||||| ||||||||||| ||||| || | || | ||||| | Sbjct 170297 AGACGTCAGAGTGCCAGGGCTCAATGTAGATGGCGAAGGCACCTGGACGCTTGTTGCCAC 170238 Query 213970 CCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGG 214029 ||||||| || | || ||||||||| ||| || | || || | ||||| | Sbjct 170237 CCTGGTCGACGTAGCGAGCGGTGTTGTTGAAGACGCGAAGCATAGGCACGATACCGTTAG 170178 Query 214030 ACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCC 214089 | ||||| ||||| || || |||||||||| | | | | | ||| ||| | Sbjct 170177 AGACACCGTTAGTTCCGGCAATGTACGAGCCGGTACCACGGATGCAGTGGATGTTGAGGC 170118 Query 214090 CTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGG 214149 | |||||||| || |||| ||||||||||||| | | | || || ||| || Sbjct 170117 CGATGCCACCAGCCGTCTTGCTGATCATGGCGCAGGTCTTGAGGGTGTCGTAGATACCAT 170058 Query 214150 CCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGC 214209 | || ||| || | | | | | || |||||| || | || || ||| | || Sbjct 170057 CGATTGAGTCGTCCTTCATGGTGACCAGGAAGCATGATGACATTTGAGGGTTGGGTGTGC 169998 Query 214210 CAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGG 214269 ||| |||||| || |||||| ||||||| | | |||| | || | ||| |||| | Sbjct 169997 CAGCGTTGAAGAGGGTGGGGGAGGCATGGGTGAAGTACTTCTCCGACATGAGGTTGTAAG 169938 Query 214270 TCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCT--CATCAGCAT 214327 | || | | | | |||| | ||||| || || ||| || ||| ||||| Sbjct 169937 TGTCGATGGCCTCGTCGATGGAACTCCCGTGGA--TGCCGACAGCAACTCGCATGAGCAT 169880 Query 214328 GTGCTGGGGCCTCTCTATGGGTCCTTTGGGGCCCTTG------AGCAGGTAGGAGCGCTC 214381 ||| ||||| | ||| | | |||| ||| ||| ||||| ||||| ||||| Sbjct 169879 GTGTTGGGGGCGCTC--GGCGACCTT----GCCGTTGATGCGCAGCAGATAGGAACGCTC 169826 Query 214382 CAGAGTCTTGAACCCAAAGTAG 214403 || |||||||| || |||||| Sbjct 169825 GAGGGTCTTGAAGCCGAAGTAG 169804 >seq214 Length=80960 Score = 174 bits (192), Expect = 3e-38 Identities = 366/536 (68%), Gaps = 20/536 (4%) Strand=Plus/Plus Query 47860 CTCA-AAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATGAAGAGGAAGGGGTTGG 47918 |||| |||||||||||||| || | || ||||||||||||||||||| |||||| || | Sbjct 11246 CTCACAAGAAGTTTGTCTTGCCTTGCAGCGAGATGTTCTCCATGAAGTCGAAGGGATTTG 11305 Query 47919 GTGTGTTATACACCCGTGTCAGGCCCATCTGTT-CCAGCAGGTGATCCGCGACGTACTCG 47977 | ||| || | | || ||| | | ||||||| | || ||||| | ||| Sbjct 11306 TGGCGTTGTAGTGCT-TCTCGTTCCCGAGGGCTACCAGCAGTCGGTCAGCGACAAATTCG 11364 Query 47978 ATGTATTTTGACATGAGG-GTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTTGT 48036 ||||| | ||| || ||| ||||||||| || | || ||| | ||| | || Sbjct 11365 ATGTACTGGCTCATAAGTCGTGC-GTTCATGCCGATCAATGAACAGGGAAGAGCATCGGT 11423 Query 48037 GAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACG----CGGGACT 48092 || || ||| ||| || || | || | | || || |||| |||| Sbjct 11424 CAGGAAAGCCTGCTCAATGGTGACAGACTCGGCAATGATGCGCAGAACGACATCGGGG-- 11481 Query 48093 CTGAGG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAA 48150 || || | || ||| ||||| || |||||| ||| |||||||| |||||| Sbjct 11482 -TGCGGCCGCTTCTTG---AGGTGGCTGA---AGAGCAAGCAAGCAAAGTCGGTGTGCAG 11534 Query 48151 GCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTG 48210 || ||||| |||||||||||| ||||||||||| |||||| ||||||| || | || Sbjct 11535 ACCCTCGTCTCGGCTGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGACCACGCTT 11594 Query 48211 TTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAA 48270 ||||||||||| || | ||||||||||| ||||||||||| ||||| || || || || Sbjct 11595 CTTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATACCCTCTACGGCAGCAAA 11654 Query 48271 CGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTC 48330 || || | ||| | || | | || || ||| ||||||| || ||||| || Sbjct 11655 GGCAACCAGGCGCTCGGCAAAGGTGGAGTCCTCGTCGTTGATCCAGCGCAGGGCCCACTC 11714 Query 48331 TGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCTTGCACT 48386 ||||| | ||||| | || || ||||| ||||| |||||| | || || || Sbjct 11715 GGCCTTTTGCTTGACGACGGGAATGGTCTCCATGGCGTCGAAGAGGTACTCGCGCT 11770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931512585738240